RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ZFYVE19Q96K21 471 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 FAM213AQ9BRX8 229 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 TASP1Q9H6P5 420 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 IL21Q9HBE4 155 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 OBP2AQ9NY56 170 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 TCHHQ07283 1943 aa23.48■■□□□ 1.35
DDX39A-215ENST00000590696 NUP210Q8TEM1 1887 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-215ENST00000590696 GCNT3O95395 438 aa23.47■■□□□ 1.35
DDX39A-215ENST00000590696 HAPLN1P10915 354 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-215ENST00000590696 SYT1P21579 422 aa23.47■■□□□ 1.35
DDX39A-215ENST00000590696 CDC25CP30307 473 aa23.47■■□□□ 1.35
DDX39A-215ENST00000590696 WNT7BP56706 349 aa23.47■■□□□ 1.35
DDX39A-215ENST00000590696 GAS6Q14393 721 aa23.47■■□□□ 1.35
DDX39A-215ENST00000590696 DCP1BQ8IZD4 617 aaKnown RBP23.47■■□□□ 1.35
DDX39A-215ENST00000590696 SAAL1Q96ER3 474 aa23.47■■□□□ 1.35
DDX39A-215ENST00000590696 ZNF560Q96MR9 790 aa23.47■■□□□ 1.35
DDX39A-215ENST00000590696 GCNAQ96QF7 691 aa23.47■■□□□ 1.35
DDX39A-215ENST00000590696 RBM12Q9NTZ6 932 aaKnown RBP23.47■■□□□ 1.35
DDX39A-215ENST00000590696 ABI2Q9NYB9 513 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-215ENST00000590696 GTSE1Q9NYZ3 720 aa23.47■■□□□ 1.35
DDX39A-215ENST00000590696 MYBPHLA2RUH7 354 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 SPECC1L-ADORA2AF8WAN1 911 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 PRAMEF12O95522 483 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 IDEP14735 1019 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 WEE1P30291 646 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 CXCL12P48061 93 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 TFAMQ00059 246 aaKnown RBP23.46■■□□□ 1.35
DDX39A-215ENST00000590696 SATB1Q01826 763 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 LRRC32Q14392 662 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 TXNDC11Q6PKC3 985 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 GPR161Q8N6U8 529 aaKnown RBP23.46■■□□□ 1.35
DDX39A-215ENST00000590696 BPIFB1Q8TDL5 484 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 PANK2Q9BZ23 570 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 PCDHB13Q9Y5F0 798 aa23.46■■□□□ 1.35
DDX39A-215ENST00000590696 LDHAP00338 332 aaKnown RBP23.45■■□□□ 1.34
DDX39A-215ENST00000590696 ITGB3P05106 788 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 POLR2BP30876 1174 aaKnown RBP23.45■■□□□ 1.34
DDX39A-215ENST00000590696 CTHP32929 405 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 PNPLA4P41247 253 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 CASP5P51878 434 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 RSPO4Q2I0M5 234 aaPredicted RBP23.45■■□□□ 1.34
DDX39A-215ENST00000590696 WDR44Q5JSH3 913 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 CCDC73Q6ZRK6 1079 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 RALGPS2Q86X27 583 aaPredicted RBP23.45■■□□□ 1.34
DDX39A-215ENST00000590696 BRSK2Q8IWQ3 736 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 SYCP3Q8IZU3 236 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 SPEM1Q8N4L4 309 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 SLC46A2Q9BY10 475 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 SMG9Q9H0W8 520 aaKnown RBP23.45■■□□□ 1.34
DDX39A-215ENST00000590696 OLFML3Q9NRN5 406 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 TMLHEQ9NVH6 421 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 DLL3Q9NYJ7 618 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 AGAP1Q9UPQ3 857 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 PCDHB5Q9Y5E4 795 aa23.45■■□□□ 1.34
DDX39A-215ENST00000590696 GPR179Q6PRD1 2367 aa23.44■■□□□ 1.34
DDX39A-215ENST00000590696 STAT6P42226 847 aa23.44■■□□□ 1.34
DDX39A-215ENST00000590696 TSPY1Q01534 308 aa23.44■■□□□ 1.34
DDX39A-215ENST00000590696 C1orf127Q8N9H9 656 aa23.44■■□□□ 1.34
DDX39A-215ENST00000590696 CACTINQ8WUQ7 758 aaKnown RBP23.44■■□□□ 1.34
DDX39A-215ENST00000590696 RBAKQ9NYW8 714 aaPredicted RBP23.44■■□□□ 1.34
DDX39A-215ENST00000590696 A0A087X0B3 334 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 GOLGA8IPA6NC78 632 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 GOLGA8JA6NMD2 632 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 GARTP22102 1010 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 PLCB2Q00722 1185 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 TNK2Q07912 1038 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 PON2Q15165 354 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 DGKKQ5KSL6 1271 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 CMTM8Q8IZV2 173 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 PDCL2Q8N4E4 241 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 CELF5Q8N6W0 485 aaKnown RBP23.43■■□□□ 1.34
DDX39A-215ENST00000590696 USP28Q96RU2 1077 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 PI4K2AQ9BTU6 479 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 FGFBP2Q9BYJ0 223 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 PANK4Q9NVE7 773 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 THG1LQ9NWX6 298 aaKnown RBP23.43■■□□□ 1.34
DDX39A-215ENST00000590696 GMEB2Q9UKD1 530 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 L1RE1Q9UN81 338 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 DNAH14Q0VDD8 3507 aa23.43■■□□□ 1.34
DDX39A-215ENST00000590696 MED19A0JLT2 244 aaPredicted RBP23.42■■□□□ 1.34
DDX39A-215ENST00000590696 FRMD3A2A2Y4 597 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 HUS1O60921 280 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 PRPF40AO75400 957 aaKnown RBP23.42■■□□□ 1.34
DDX39A-215ENST00000590696 F11P03951 625 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 HMGA1P17096 107 aaKnown RBP23.42■■□□□ 1.34
DDX39A-215ENST00000590696 GPR15P49685 360 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 ALCAMQ13740 583 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 SLC39A14Q15043 492 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 LPAL2Q16609 132 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 SCARA3Q6AZY7 606 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 Q6ZS52 159 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 TMEM150AQ86TG1 271 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 CSGALNACT2Q8N6G5 542 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 MAB21L3Q8N8X9 362 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 NOC3LQ8WTT2 800 aaKnown RBP23.42■■□□□ 1.34
DDX39A-215ENST00000590696 FAM84AQ96KN4 292 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 CBWD1Q9BRT8 395 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 PCIF1Q9H4Z3 704 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 ZMYM5Q9UJ78 669 aa23.42■■□□□ 1.34
DDX39A-215ENST00000590696 RAB23Q9ULC3 237 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms