RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 C2CD4DB7Z1M9 353 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 SP100P23497 879 aaPredicted RBP17.77■□□□□ 0.44
GCDH-213ENST00000590627 NOP14P78316 857 aaKnown RBP17.77■□□□□ 0.44
GCDH-213ENST00000590627 MYO1EQ12965 1108 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 TBX2Q13207 712 aaPredicted RBP17.77■□□□□ 0.44
GCDH-213ENST00000590627 MTMR3Q13615 1198 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 TRIM14Q14142 442 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 ATAT1Q5SQI0 421 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 PHLDB3Q6NSJ2 640 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 PPFIBP1Q86W92 1011 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 ZNF280BQ86YH2 543 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 KREMEN2Q8NCW0 462 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 NEK11Q8NG66 645 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 HPDLQ96IR7 371 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 FAM81BQ96LP2 452 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 PCMTD1Q96MG8 357 aaPredicted RBP17.77■□□□□ 0.44
GCDH-213ENST00000590627 ZNF560Q96MR9 790 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 FAM193BQ96PV7 902 aaPredicted RBP17.77■□□□□ 0.44
GCDH-213ENST00000590627 TMEM175Q9BSA9 504 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 PI4K2AQ9BTU6 479 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 APOBEC3GQ9HC16 384 aaKnown RBP17.77■□□□□ 0.44
GCDH-213ENST00000590627 FAM207AQ9NSI2 230 aaPredicted RBP17.77■□□□□ 0.44
GCDH-213ENST00000590627 USTQ9Y2C2 406 aa17.77■□□□□ 0.44
GCDH-213ENST00000590627 A0A1W2PQJ5 194 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 PODXLO00592 558 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 PPEF2O14830 753 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 EPHB6O15197 1021 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 B4GALT3O60512 393 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 UCHL3P15374 230 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 SLC11A1P49279 550 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 CLCNKBP51801 687 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 VCPP55072 806 aaKnown RBP17.76■□□□□ 0.43
GCDH-213ENST00000590627 GCNT1Q02742 428 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 ZNF699Q32M78 642 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 RARS2Q5T160 578 aaKnown RBP17.76■□□□□ 0.43
GCDH-213ENST00000590627 DCLRE1AQ6PJP8 1040 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 TMC6Q7Z403 805 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 ZDHHC14Q8IZN3 488 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 PLCD3Q8N3E9 789 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 SLC22A17Q8WUG5 538 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 BCL7CQ8WUZ0 217 aaPredicted RBP17.76■□□□□ 0.43
GCDH-213ENST00000590627 AUTS2Q8WXX7 1259 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 TATDN2Q93075 761 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 PDLIM2Q96JY6 352 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 NAA15Q9BXJ9 866 aaKnown RBP17.76■□□□□ 0.43
GCDH-213ENST00000590627 CEP72Q9P209 647 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 IMPACTQ9P2X3 320 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 DNAJB4Q9UDY4 337 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 NUB1Q9Y5A7 615 aa17.76■□□□□ 0.43
GCDH-213ENST00000590627 CASTOR2A6NHX0 329 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 TMEM189-UBE2V1I3L0A0 370 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 EPCAMP16422 314 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 TRIM21P19474 475 aaKnown RBP17.75■□□□□ 0.43
GCDH-213ENST00000590627 AARSP49588 968 aaKnown RBP eCLIP17.75■□□□□ 0.43
GCDH-213ENST00000590627 TAF6P49848 677 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 LILRA4P59901 499 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 APBA1Q02410 837 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 PTPN14Q15678 1187 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 ZNF667Q5HYK9 610 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 CD300LGQ6UXG3 332 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 ENOSF1Q7L5Y1 443 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 ARHGEF19Q8IW93 802 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 TDRD5Q8NAT2 981 aaKnown RBP17.75■□□□□ 0.43
GCDH-213ENST00000590627 JAKMIP2Q96AA8 810 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 PHOX2BQ99453 314 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 NIF3L1Q9GZT8 377 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 FAM124BQ9H5Z6 455 aaPredicted RBP17.75■□□□□ 0.43
GCDH-213ENST00000590627 GDAP2Q9NXN4 497 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 CAPN11Q9UMQ6 739 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 USP34Q70CQ2 3546 aa17.75■□□□□ 0.43
GCDH-213ENST00000590627 DENND4AQ7Z401 1863 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 GYPCP04921 128 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 ALDH2P05091 517 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 P4HA1P13674 534 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 TBXAS1P24557 533 aaPredicted RBP17.74■□□□□ 0.43
GCDH-213ENST00000590627 POLR2FP61218 127 aaKnown RBP17.74■□□□□ 0.43
GCDH-213ENST00000590627 LRMPQ12912 555 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 SV2CQ496J9 727 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 IQCEQ6IPM2 695 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 SPOPLQ6IQ16 392 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 LIMS2Q7Z4I7 341 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 C12orf76Q8N812 135 aaPredicted RBP17.74■□□□□ 0.43
GCDH-213ENST00000590627 PAAF1Q9BRP4 392 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 VN1R3Q9BXE9 311 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 EMILIN2Q9BXX0 1053 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 SFXN1Q9H9B4 322 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 UBE2TQ9NPD8 197 aaPredicted RBP17.74■□□□□ 0.43
GCDH-213ENST00000590627 DNAJC12Q9UKB3 198 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 FHOD1Q9Y613 1164 aa17.74■□□□□ 0.43
GCDH-213ENST00000590627 TDRD15B5MCY1 1934 aaKnown RBP17.74■□□□□ 0.43
GCDH-213ENST00000590627 KPNA7A9QM74 516 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 SPTLC1O15269 473 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 WEE2P0C1S8 567 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 FAM163BP0C2L3 166 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 ASPAP45381 313 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 MFAP3P55082 362 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 CUL2Q13617 745 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 WDR72Q3MJ13 1102 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 GJB7Q6PEY0 223 aa17.73■□□□□ 0.43
GCDH-213ENST00000590627 GPR149Q86SP6 731 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms