RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 NDUFV1P49821 464 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 NDST1P52848 882 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 JAM2P57087 298 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 PLPP4Q5VZY2 271 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 CRYBG2Q8N1P7 616 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 OR6B3Q8NGW1 331 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 OR10T2Q8NGX3 314 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 AUTS2Q8WXX7 1259 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 SHC3Q92529 594 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 IQCDQ96DY2 449 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 MRFAP1L1Q96HT8 127 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 PCMTD1Q96MG8 357 aaPredicted RBP12.87□□□□□ -0.35
APOC1-206ENST00000590334 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 NUP58Q9BVL2 599 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 STK33Q9BYT3 514 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 EDEM3Q9BZQ6 932 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 TRIM5Q9C035 493 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 TTYH3Q9C0H2 523 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 GPR88Q9GZN0 384 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 ZCWPW1Q9H0M4 648 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 CEP72Q9P209 647 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 CDH9Q9ULB4 789 aa12.87□□□□□ -0.35
APOC1-206ENST00000590334 GREB1Q4ZG55 1949 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 A0A1W2PQJ5 194 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 GOLGA6L3A6NEY3 463 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 A8MXQ7 604 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 TEX28O15482 410 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 ADAM12O43184 909 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 CD58P19256 250 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
APOC1-206ENST00000590334 ZNF75DP51815 510 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 ZNF132P52740 706 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 RAD23BP54727 409 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 POLR2FP61218 127 aaKnown RBP12.86□□□□□ -0.35
APOC1-206ENST00000590334 PLCB2Q00722 1185 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 RAB33AQ14088 237 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 INTS6LQ5JSJ4 861 aaKnown RBP12.86□□□□□ -0.35
APOC1-206ENST00000590334 SPECC1LQ69YQ0 1117 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 FAM171BQ6P995 826 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 VSTM4Q8IW00 320 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 MICAL1Q8TDZ2 1067 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 TNIP3Q96KP6 325 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 KLHL5Q96PQ7 755 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 NT5C1AQ9BXI3 368 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 EMILIN2Q9BXX0 1053 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 GRPEL1Q9HAV7 217 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 HMGXB4Q9UGU5 601 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 MYO6Q9UM54 1294 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 PCDHGC5Q9Y5F6 944 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 CDY1Q9Y6F8 540 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 MYH10P35580 1976 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 EYSQ5T1H1 3165 aa12.86□□□□□ -0.35
APOC1-206ENST00000590334 F8VZ95 297 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 RNF225M0QZC1 329 aaPredicted RBP12.85□□□□□ -0.35
APOC1-206ENST00000590334 HCRTO43612 131 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 ABLIM3O94929 683 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 ADH1AP07327 375 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 PAEPP09466 180 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 PDGFRBP09619 1106 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 PTPN1P18031 435 aaKnown RBP12.85□□□□□ -0.35
APOC1-206ENST00000590334 RPL17P18621 184 aaKnown RBP12.85□□□□□ -0.35
APOC1-206ENST00000590334 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
APOC1-206ENST00000590334 ACAT1P24752 427 aaKnown RBP12.85□□□□□ -0.35
APOC1-206ENST00000590334 OR1D2P34982 312 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 TSPY1Q01534 308 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 SMARCB1Q12824 385 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 GPR17Q13304 367 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 ADGRE1Q14246 886 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 DRAP1Q14919 205 aaPredicted RBP12.85□□□□□ -0.35
APOC1-206ENST00000590334 ARHGAP44Q17R89 818 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 TPGS2Q68CL5 300 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 LILRA6Q6PI73 481 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 LRRTM3Q86VH5 581 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 FAM71AQ8IYT1 594 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 DCP1BQ8IZD4 617 aaKnown RBP12.85□□□□□ -0.35
APOC1-206ENST00000590334 SLC4A11Q8NBS3 891 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 B3GALNT2Q8NCR0 500 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 ZNF461Q8TAF7 563 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 BAP1Q92560 729 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 TMEM176AQ96HP8 235 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 TWNKQ96RR1 684 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 TMEM209Q96SK2 561 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
APOC1-206ENST00000590334 SYT15Q9BQS2 421 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 ELOVL4Q9GZR5 314 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 DPEP3Q9H4B8 488 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 CRTAC1Q9NQ79 661 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 KIAA1257Q9ULG3 409 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 MAFFQ9ULX9 164 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 PCDHB4Q9Y5E5 795 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.85□□□□□ -0.355e-9■□□□□ 8.6
APOC1-206ENST00000590334 MTCH2Q9Y6C9 303 aa12.85□□□□□ -0.35
APOC1-206ENST00000590334 WDR27A2RRH5 827 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 FOXN3O00409 490 aaPredicted RBP12.84□□□□□ -0.35
APOC1-206ENST00000590334 ATP2C2O75185 946 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 GYPCP04921 128 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 CLCN4P51793 760 aa12.84□□□□□ -0.35
APOC1-206ENST00000590334 ROR1Q01973 937 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms