RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 PCSK1P29120 753 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 POLR2BP30876 1174 aaKnown RBP8.18□□□□□ -1.1
NPC1-208ENST00000590301 GDI1P31150 447 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 CASP5P51878 434 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 RPL10AP62906 217 aaKnown RBP8.18□□□□□ -1.1
NPC1-208ENST00000590301 MYL7Q01449 175 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 FCHO2Q0JRZ9 810 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 MYO1EQ12965 1108 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 PPP2R5DQ14738 602 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 TEAD2Q15562 447 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 TAF12Q16514 161 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 DUOXA2Q1HG44 320 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 WSCD1Q658N2 575 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 VITQ6UXI7 678 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 MAMSTRQ6ZN01 415 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 DPH6Q7L8W6 267 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 YAF2Q8IY57 180 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 GPD1LQ8N335 351 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 C1orf127Q8N9H9 656 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 ST13P5Q8NFI4 369 aaPredicted RBP8.18□□□□□ -1.1
NPC1-208ENST00000590301 FAM200AQ8TCP9 573 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 SAAL1Q96ER3 474 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 ANKRD36BP1Q96IX9 119 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 ZSWIM3Q96MP5 696 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 SEPT5Q99719 369 aaPredicted RBP8.18□□□□□ -1.1
NPC1-208ENST00000590301 C7orf25Q9BPX7 421 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 ACBD6Q9BR61 282 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 FAM126AQ9BYI3 521 aaPredicted RBP8.18□□□□□ -1.1
NPC1-208ENST00000590301 PANK2Q9BZ23 570 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 PLA2G2FQ9BZM2 168 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 CRISPLD1Q9H336 500 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 C8orf33Q9H7E9 229 aaPredicted RBP8.18□□□□□ -1.1
NPC1-208ENST00000590301 ZNF334Q9HCZ1 680 aaPredicted RBP8.18□□□□□ -1.1
NPC1-208ENST00000590301 HEBP1Q9NRV9 189 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 SPATA6Q9NWH7 488 aaPredicted RBP8.18□□□□□ -1.1
NPC1-208ENST00000590301 FAM13BQ9NYF5 915 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 AGAP1Q9UPQ3 857 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 SLC27A5Q9Y2P5 690 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 PCDHB5Q9Y5E4 795 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 PCDHGA2Q9Y5H1 932 aa8.18□□□□□ -1.1
NPC1-208ENST00000590301 ZNF292O60281 2723 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 PVALEFA0A1B0GWK0 134 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 HEPACAM2A8MVW5 462 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 DPYSL4O14531 572 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 PRPF40AO75400 957 aaKnown RBP8.17□□□□□ -1.1
NPC1-208ENST00000590301 TNNC2P02585 160 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 CSH1P0DML2 217 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 CSH2P0DML3 217 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 HAPLN1P10915 354 aaPredicted RBP8.17□□□□□ -1.1
NPC1-208ENST00000590301 TARSP26639 723 aaKnown RBP8.17□□□□□ -1.1
NPC1-208ENST00000590301 GABRR2P28476 465 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 ME1P48163 572 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 LHX1P48742 406 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 ASIC1P78348 528 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 GRM2Q14416 872 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 MAPRE1Q15691 268 aaKnown RBP8.17□□□□□ -1.1
NPC1-208ENST00000590301 MGAT5BQ3V5L5 792 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 ARHGAP29Q52LW3 1261 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 FAM26FQ5R3K3 315 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 SHC4Q6S5L8 630 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 UNC13DQ70J99 1090 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 GAREM2Q75VX8 874 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 EPM2AIP1Q7L775 607 aaPredicted RBP8.17□□□□□ -1.1
NPC1-208ENST00000590301 HS2ST1Q7LGA3 356 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 WDR49Q8IV35 697 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 TMEM130Q8N3G9 435 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 PDCL2Q8N4E4 241 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 CSGALNACT2Q8N6G5 542 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 TTC9BQ8N6N2 239 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 TOP6BLQ8N6T0 577 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 CXorf38Q8TB03 319 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 GOLGA5Q8TBA6 731 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 ZNF507Q8TCN5 953 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 CSGALNACT1Q8TDX6 532 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 DHX58Q96C10 678 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 FUBP3Q96I24 572 aaKnown RBP eCLIP8.17□□□□□ -1.1
NPC1-208ENST00000590301 CEP295NLQ96MC4 621 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 TMEM209Q96SK2 561 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 CBWD1Q9BRT8 395 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 IKZF4Q9H2S9 585 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 ATXN3LQ9H3M9 355 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 TASP1Q9H6P5 420 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 INTS13Q9NVM9 706 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 THG1LQ9NWX6 298 aaKnown RBP8.17□□□□□ -1.1
NPC1-208ENST00000590301 HSPBP1Q9NZL4 362 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 TFIP11Q9UBB9 837 aaKnown RBP8.17□□□□□ -1.1
NPC1-208ENST00000590301 PIAS3Q9Y6X2 628 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 PLXNA3P51805 1871 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 KMT2EQ8IZD2 1858 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 TDRD15B5MCY1 1934 aaKnown RBP8.17□□□□□ -1.1
NPC1-208ENST00000590301 GVINP1Q7Z2Y8 2422 aa8.17□□□□□ -1.1
NPC1-208ENST00000590301 ARNTLO00327 626 aa8.16□□□□□ -1.1
NPC1-208ENST00000590301 GABRDO14764 452 aa8.16□□□□□ -1.1
NPC1-208ENST00000590301 KINO60870 393 aaKnown RBP8.16□□□□□ -1.1
NPC1-208ENST00000590301 PRPF6O94906 941 aaKnown RBP8.16□□□□□ -1.1
NPC1-208ENST00000590301 F13A1P00488 732 aa8.16□□□□□ -1.1
NPC1-208ENST00000590301 FAM163BP0C2L3 166 aa8.16□□□□□ -1.1
NPC1-208ENST00000590301 GJA1P17302 382 aa8.16□□□□□ -1.1
NPC1-208ENST00000590301 ATF6P18850 670 aa8.16□□□□□ -1.1
NPC1-208ENST00000590301 VIPR2P41587 438 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms