RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 DNAJB7Q7Z6W7 309 aaPredicted RBP22.13■■□□□ 1.13
CIRBP-226ENST00000590171 OSTM1Q86WC4 334 aa22.13■■□□□ 1.13
CIRBP-226ENST00000590171 DCP1BQ8IZD4 617 aaKnown RBP22.13■■□□□ 1.13
CIRBP-226ENST00000590171 TMEM86AQ8N2M4 240 aa22.13■■□□□ 1.13
CIRBP-226ENST00000590171 SPPL2BQ8TCT7 592 aa22.13■■□□□ 1.13
CIRBP-226ENST00000590171 ZFP14Q9HCL3 533 aa22.13■■□□□ 1.13
CIRBP-226ENST00000590171 DDX43Q9NXZ2 648 aaKnown RBP22.13■■□□□ 1.13
CIRBP-226ENST00000590171 ABI2Q9NYB9 513 aaPredicted RBP22.13■■□□□ 1.13
CIRBP-226ENST00000590171 CGNQ9P2M7 1197 aaKnown RBP22.13■■□□□ 1.13
CIRBP-226ENST00000590171 TCHHQ07283 1943 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 COL4A3Q01955 1670 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 DLATP10515 647 aaKnown RBP22.12■■□□□ 1.13
CIRBP-226ENST00000590171 HAPLN1P10915 354 aaPredicted RBP22.12■■□□□ 1.13
CIRBP-226ENST00000590171 ACAT1P24752 427 aaKnown RBP22.12■■□□□ 1.13
CIRBP-226ENST00000590171 TSPY1Q01534 308 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 SNW1Q13573 536 aaKnown RBP22.12■■□□□ 1.13
CIRBP-226ENST00000590171 SOWAHAQ2M3V2 549 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 GAREM2Q75VX8 874 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 TRAPPC11Q7Z392 1133 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 ITIH5Q86UX2 942 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 ALYREFQ86V81 257 aaKnown RBP22.12■■□□□ 1.13
CIRBP-226ENST00000590171 CCDC105Q8IYK2 499 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 ADGRF2Q8IZF7 708 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 TOP6BLQ8N6T0 577 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 ZSCAN18Q8TBC5 510 aaPredicted RBP22.12■■□□□ 1.13
CIRBP-226ENST00000590171 SMARCD2Q92925 531 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 CCDC127Q96BQ5 260 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 HPDLQ96IR7 371 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 CGRRF1Q99675 332 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 ACBD6Q9BR61 282 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 GZF1Q9H116 711 aaPredicted RBP22.12■■□□□ 1.13
CIRBP-226ENST00000590171 GOLPH3LQ9H4A5 285 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 GDPD2Q9HCC8 539 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 FAM86C1Q9NVL1 165 aa22.12■■□□□ 1.13
CIRBP-226ENST00000590171 A0A1W2PQ27 194 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 A0A1W2PQ64 194 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 A0A1W2PQD8 194 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 HCRTO43612 131 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 MYL1P05976 194 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 PRR29P0C7W0 189 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 TNNI1P19237 187 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 STARD6P59095 220 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 MYL7Q01449 175 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 PFKPQ01813 784 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 MYO1EQ12965 1108 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 PSMD2Q13200 908 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 GRM2Q14416 872 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 BECN1Q14457 450 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 MLF2Q15773 248 aaPredicted RBP22.11■■□□□ 1.13
CIRBP-226ENST00000590171 SLC44A4Q53GD3 710 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 STXBP5Q5T5C0 1151 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 FSIP1Q8NA03 581 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 SPATA18Q8TC71 538 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 FAM200AQ8TCP9 573 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 FNBP1Q96RU3 617 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 PKMYT1Q99640 499 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 SLITRK6Q9H5Y7 841 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 R3HCC1Q9Y3T6 440 aaKnown RBP22.11■■□□□ 1.13
CIRBP-226ENST00000590171 PCDHB5Q9Y5E4 795 aa22.11■■□□□ 1.13
CIRBP-226ENST00000590171 NCANO14594 1321 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 GABRDO14764 452 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 EXOC3O60645 756 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 RPN1P04843 607 aaKnown RBP22.1■■□□□ 1.13
CIRBP-226ENST00000590171 GABRR2P28476 465 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 VIPR2P41587 438 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 VEPH1Q14D04 833 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 CCDC142Q17RM4 750 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 INTS6LQ5JSJ4 861 aaKnown RBP22.1■■□□□ 1.13
CIRBP-226ENST00000590171 VITQ6UXI7 678 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 DPH6Q7L8W6 267 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 LIMS2Q7Z4I7 341 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 DTWD2Q8NBA8 298 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 GOLGA5Q8TBA6 731 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 GIPC2Q8TF65 315 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 SHDQ96IW2 340 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 MKNK1Q9BUB5 465 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 FOXQ1Q9C009 403 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 GPR88Q9GZN0 384 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 IRF2BPLQ9H1B7 796 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 TRPV4Q9HBA0 871 aa22.1■■□□□ 1.13
CIRBP-226ENST00000590171 PRPF40AO75400 957 aaKnown RBP22.09■■□□□ 1.13
CIRBP-226ENST00000590171 CST3P01034 146 aaPredicted RBP22.09■■□□□ 1.13
CIRBP-226ENST00000590171 LHX1P48742 406 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 MRE11P49959 708 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 PRKCQQ04759 706 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 NFE2Q16621 373 aaPredicted RBP22.09■■□□□ 1.13
CIRBP-226ENST00000590171 KRBA2Q6ZNG9 492 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 PLEKHO2Q8TD55 490 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 KBTBD7Q8WVZ9 684 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 ZNF516Q92618 1163 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 ATOH1Q92858 354 aaPredicted RBP22.09■■□□□ 1.13
CIRBP-226ENST00000590171 PI4K2AQ9BTU6 479 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 DDX23Q9BUQ8 820 aaKnown RBP22.09■■□□□ 1.13
CIRBP-226ENST00000590171 KCTD10Q9H3F6 313 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 ATXN3LQ9H3M9 355 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 IL21Q9HBE4 155 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 GTF3C4Q9UKN8 822 aa22.09■■□□□ 1.13
CIRBP-226ENST00000590171 FGF19O95750 216 aa22.08■■□□□ 1.13
CIRBP-226ENST00000590171 DCNP07585 359 aaKnown RBP22.08■■□□□ 1.13
CIRBP-226ENST00000590171 GPR15P49685 360 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms