RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 ZFYVE19Q96K21 471 aa13.66□□□□□ -0.22
RFX1-207ENST00000589937 ZNF560Q96MR9 790 aa13.66□□□□□ -0.22
RFX1-207ENST00000589937 BLZF1Q9H2G9 400 aa13.66□□□□□ -0.22
RFX1-207ENST00000589937 TNMDQ9H2S6 317 aa13.66□□□□□ -0.22
RFX1-207ENST00000589937 IL21Q9HBE4 155 aa13.66□□□□□ -0.22
RFX1-207ENST00000589937 SPATA6Q9NWH7 488 aaPredicted RBP13.66□□□□□ -0.22
RFX1-207ENST00000589937 MAFFQ9ULX9 164 aa13.66□□□□□ -0.22
RFX1-207ENST00000589937 PCDHB13Q9Y5F0 798 aa13.66□□□□□ -0.22
RFX1-207ENST00000589937 ARNTLO00327 626 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 EXTL3O43909 919 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 CUTAO60888 179 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 PPP6R2O75170 966 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 KRT19P08727 400 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 GABRR2P28476 465 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 FZD5Q13467 585 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 WDR44Q5JSH3 913 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 GPR158Q5T848 1215 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 TSSK4Q6SA08 328 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 EPM2AIP1Q7L775 607 aaPredicted RBP13.65□□□□□ -0.22
RFX1-207ENST00000589937 METTL23Q86XA0 190 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 NELFCDQ8IXH7 590 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 TTC8Q8TAM2 541 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 FAM200AQ8TCP9 573 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 DNASE1L2Q92874 299 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 ZNF396Q96N95 335 aaPredicted RBP13.65□□□□□ -0.22
RFX1-207ENST00000589937 TRMT61BQ9BVS5 477 aaKnown RBP13.65□□□□□ -0.22
RFX1-207ENST00000589937 OXCT2Q9BYC2 517 aaPredicted RBP13.65□□□□□ -0.22
RFX1-207ENST00000589937 TRPV4Q9HBA0 871 aa13.65□□□□□ -0.22
RFX1-207ENST00000589937 SLC38A8A6NNN8 435 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 POLR2DO15514 142 aaKnown RBP13.64□□□□□ -0.23
RFX1-207ENST00000589937 HAPLN1P10915 354 aaPredicted RBP13.64□□□□□ -0.23
RFX1-207ENST00000589937 PSMC3P17980 439 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 DNM1Q05193 864 aaKnown RBP13.64□□□□□ -0.23
RFX1-207ENST00000589937 ALCAMQ13740 583 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 TMEM150AQ86TG1 271 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 ARID3BQ8IVW6 561 aaPredicted RBP13.64□□□□□ -0.23
RFX1-207ENST00000589937 ADSSL1Q8N142 457 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 GPD1LQ8N335 351 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 CSGALNACT2Q8N6G5 542 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 LEMD2Q8NC56 503 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 RIN3Q8TB24 985 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 PKMYT1Q99640 499 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 PI4K2AQ9BTU6 479 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 ATXN3LQ9H3M9 355 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 HSPBP1Q9NZL4 362 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 DSEQ9UL01 958 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 PCDHA7Q9UN72 937 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 PIAS3Q9Y6X2 628 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 DNAH14Q0VDD8 3507 aa13.64□□□□□ -0.23
RFX1-207ENST00000589937 MYH10P35580 1976 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 EML5Q05BV3 1969 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 CLIC2O15247 247 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 TGFB1I1O43294 461 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 TMEM191BP0C7N4 346 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 HOXC13P31276 330 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 AFMP43652 599 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 CYP2J2P51589 502 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 PSMC1P62191 440 aaKnown RBP13.63□□□□□ -0.23
RFX1-207ENST00000589937 POU5F1Q01860 360 aaKnown RBP13.63□□□□□ -0.23
RFX1-207ENST00000589937 TNK2Q07912 1038 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 EHHADHQ08426 723 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 CUL4BQ13620 913 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 FAM26FQ5R3K3 315 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 ZNF852Q6ZMS4 543 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 NT5DC4Q86YG4 428 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 MFSD6LQ8IWD5 586 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 CLDN23Q96B33 292 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 BCO2Q9BYV7 579 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
RFX1-207ENST00000589937 AGPAT3Q9NRZ7 376 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 DDX43Q9NXZ2 648 aaKnown RBP13.63□□□□□ -0.23
RFX1-207ENST00000589937 ITGA11Q9UKX5 1188 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 SNX9Q9Y5X1 595 aa13.63□□□□□ -0.23
RFX1-207ENST00000589937 ZNF263O14978 683 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 ATP2C2O75185 946 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 TADA3O75528 432 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 HSP90AA1P07900 732 aaKnown RBP13.62□□□□□ -0.23
RFX1-207ENST00000589937 HMGA1P17096 107 aaKnown RBP13.62□□□□□ -0.23
RFX1-207ENST00000589937 CYP2F1P24903 491 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 ME1P48163 572 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 CSTF1Q05048 431 aaKnown RBP13.62□□□□□ -0.23
RFX1-207ENST00000589937 MTAPQ13126 283 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 DDR2Q16832 855 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 SOWAHAQ2M3V2 549 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 INTS6LQ5JSJ4 861 aaKnown RBP13.62□□□□□ -0.23
RFX1-207ENST00000589937 RESP18Q5W5W9 173 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 TXNDC11Q6PKC3 985 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 ADGRF2Q8IZF7 708 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 THEM5Q8N1Q8 247 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 LRRC52Q8N7C0 313 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 RDH13Q8NBN7 331 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 DEPDC1BQ8WUY9 529 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 SCFD1Q8WVM8 642 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 KBTBD7Q8WVZ9 684 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 ELMO3Q96BJ8 720 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 C7orf25Q9BPX7 421 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 TMEM206Q9H813 350 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 RBM12Q9NTZ6 932 aaKnown RBP13.62□□□□□ -0.23
RFX1-207ENST00000589937 INTS13Q9NVM9 706 aa13.62□□□□□ -0.23
RFX1-207ENST00000589937 GTSE1Q9NYZ3 720 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms