RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 YEATS4O95619 227 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 ATF6P18850 670 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 CDC25CP30307 473 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
VAT1-206ENST00000589709 AMPD3Q01432 767 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 CSTF1Q05048 431 aaKnown RBP13.16□□□□□ -0.3
VAT1-206ENST00000589709 NFE2Q16621 373 aaPredicted RBP13.16□□□□□ -0.3
VAT1-206ENST00000589709 MGAT5BQ3V5L5 792 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 YAF2Q8IY57 180 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 TMEM86AQ8N2M4 240 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 ZSWIM2Q8NEG5 633 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 FAM3CQ92520 227 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 SEPT5Q99719 369 aaPredicted RBP13.16□□□□□ -0.3
VAT1-206ENST00000589709 ACBD6Q9BR61 282 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 FAM126AQ9BYI3 521 aaPredicted RBP13.16□□□□□ -0.3
VAT1-206ENST00000589709 FGFBP2Q9BYJ0 223 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 TRIM9Q9C026 710 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 CHRDQ9H2X0 955 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 C8orf33Q9H7E9 229 aaPredicted RBP13.16□□□□□ -0.3
VAT1-206ENST00000589709 PRMT8Q9NR22 394 aaPredicted RBP13.16□□□□□ -0.3
VAT1-206ENST00000589709 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
VAT1-206ENST00000589709 ITGA11Q9UKX5 1188 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 AGAP1Q9UPQ3 857 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 PCDHB5Q9Y5E4 795 aa13.16□□□□□ -0.3
VAT1-206ENST00000589709 NCANO14594 1321 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 FANCMQ8IYD8 2048 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 OTOGLQ3ZCN5 2332 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 KINO60870 393 aaKnown RBP13.15□□□□□ -0.3
VAT1-206ENST00000589709 CUTAO60888 179 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 HUS1O60921 280 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 ITGB3P05106 788 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 RBP5P82980 135 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 TSPY1Q01534 308 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 MTAPQ13126 283 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 SURF1Q15526 300 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 ARHGAP29Q52LW3 1261 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 STXBP5Q5T5C0 1151 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 GPR158Q5T848 1215 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 GPD1LQ8N335 351 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 PDCL2Q8N4E4 241 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 CSGALNACT2Q8N6G5 542 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 IQUBQ8NA54 791 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 SUMF1Q8NBK3 374 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 CSGALNACT1Q8TDX6 532 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 LEO1Q8WVC0 666 aaPredicted RBP13.15□□□□□ -0.3
VAT1-206ENST00000589709 ATRIPQ8WXE1 791 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 RUBCNQ92622 972 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 LRRC3BQ96PB8 259 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 LPIN3Q9BQK8 851 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 LMAN1LQ9HAT1 526 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 PDE11AQ9HCR9 933 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 ABCB6Q9NP58 842 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 ZSCAN32Q9NX65 697 aa13.15□□□□□ -0.3
VAT1-206ENST00000589709 NDRG2Q9UN36 371 aaKnown RBP13.15□□□□□ -0.3
VAT1-206ENST00000589709 TSC2P49815 1807 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 GOLGA8IPA6NC78 632 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 ZNF233A6NK53 670 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 GOLGA8JA6NMD2 632 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 DPYSL4O14531 572 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 EIF3DO15371 548 aaKnown RBP eCLIP13.14□□□□□ -0.31
VAT1-206ENST00000589709 LILRB5O75023 590 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 CHRNB1P11230 501 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 HMGA1P17096 107 aaKnown RBP13.14□□□□□ -0.31
VAT1-206ENST00000589709 CCNE1P24864 410 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 HOXD13P35453 343 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 PLCB2Q00722 1185 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 FOXK2Q01167 660 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 TAF12Q16514 161 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 EPM2AIP1Q7L775 607 aaPredicted RBP13.14□□□□□ -0.31
VAT1-206ENST00000589709 DPH6Q7L8W6 267 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 LIMS2Q7Z4I7 341 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 RALGPS2Q86X27 583 aaPredicted RBP13.14□□□□□ -0.31
VAT1-206ENST00000589709 TOP6BLQ8N6T0 577 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 ZNF507Q8TCN5 953 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 GCNAQ96QF7 691 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 SLC46A2Q9BY10 475 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 MAGEF1Q9HAY2 307 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 INTS13Q9NVM9 706 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 ABI2Q9NYB9 513 aaPredicted RBP13.14□□□□□ -0.31
VAT1-206ENST00000589709 SIX4Q9UIU6 781 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 L1RE1Q9UN81 338 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 GPR179Q6PRD1 2367 aa13.14□□□□□ -0.31
VAT1-206ENST00000589709 MYBPHLA2RUH7 354 aa13.13□□□□□ -0.31
VAT1-206ENST00000589709 GABRDO14764 452 aa13.13□□□□□ -0.31
VAT1-206ENST00000589709 F11P03951 625 aa13.13□□□□□ -0.31
VAT1-206ENST00000589709 TMEM191BP0C7N4 346 aa13.13□□□□□ -0.31
VAT1-206ENST00000589709 CSH1P0DML2 217 aa13.13□□□□□ -0.31
VAT1-206ENST00000589709 CSH2P0DML3 217 aa13.13□□□□□ -0.31
VAT1-206ENST00000589709 TDGF1P13385 188 aa13.13□□□□□ -0.31
VAT1-206ENST00000589709 DDX6P26196 483 aaKnown RBP eCLIP13.13□□□□□ -0.314e-6■■■■□ 24.4
VAT1-206ENST00000589709 LHX1P48742 406 aa13.13□□□□□ -0.31
VAT1-206ENST00000589709 NLRP12P59046 1061 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms