RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 LHX1P48742 406 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 CDR1P51861 262 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 ZNF132P52740 706 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 PSMC1P62191 440 aaKnown RBP21.37■■□□□ 1.01
DNMT1-216ENST00000588952 ZNF394Q53GI3 561 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 SPECC1LQ69YQ0 1117 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 ZNF280DQ6N043 979 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 TMC6Q7Z403 805 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 CLSTN3Q9BQT9 956 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 STK33Q9BYT3 514 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 PRDM12Q9H4Q4 367 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 RXFP1Q9HBX9 757 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 MRPL17Q9NRX2 175 aaKnown RBP21.37■■□□□ 1.01
DNMT1-216ENST00000588952 CNTN6Q9UQ52 1028 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 BACE2Q9Y5Z0 518 aa21.37■■□□□ 1.01
DNMT1-216ENST00000588952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.36■■□□□ 1.01
DNMT1-216ENST00000588952 C2orf71A6NGG8 1288 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 F8VZ95 297 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 H7C4K7 107 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 RAD23BP54727 409 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 SMC1AQ14683 1233 aaKnown RBP21.36■■□□□ 1.01
DNMT1-216ENST00000588952 FIGNQ5HY92 759 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 TMEM270Q6UE05 265 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 LRRTM3Q86VH5 581 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 GPR65Q8IYL9 337 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 MRPL43Q8N983 215 aaKnown RBP21.36■■□□□ 1.01
DNMT1-216ENST00000588952 SLC4A11Q8NBS3 891 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 RBBP8NLQ8NC74 664 aaPredicted RBP21.36■■□□□ 1.01
DNMT1-216ENST00000588952 JAKMIP2Q96AA8 810 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 FAM81BQ96LP2 452 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 PKMYT1Q99640 499 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 SYT15Q9BQS2 421 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 LMAN2LQ9H0V9 348 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 CRTAC1Q9NQ79 661 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 TMLHEQ9NVH6 421 aa21.36■■□□□ 1.01
DNMT1-216ENST00000588952 TRANK1O15050 2925 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 CNPP09543 421 aaKnown RBP21.35■■□□□ 1.01
DNMT1-216ENST00000588952 KRT5P13647 590 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 CA8P35219 290 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 MRE11P49959 708 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 FXR1P51114 621 aaKnown RBP eCLIP21.35■■□□□ 1.01
DNMT1-216ENST00000588952 YWHAEP62258 255 aaKnown RBP21.35■■□□□ 1.01
DNMT1-216ENST00000588952 TBX2Q13207 712 aaPredicted RBP21.35■■□□□ 1.01
DNMT1-216ENST00000588952 INTS6LQ5JSJ4 861 aaKnown RBP21.35■■□□□ 1.01
DNMT1-216ENST00000588952 ACOT1Q86TX2 421 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 UNC93AQ86WB7 457 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 GLYCTKQ8IVS8 523 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 THEM5Q8N1Q8 247 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 FAM161BQ96MY7 647 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 ACBD6Q9BR61 282 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 ZCWPW1Q9H0M4 648 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 FAM124BQ9H5Z6 455 aaPredicted RBP21.35■■□□□ 1.01
DNMT1-216ENST00000588952 NGRNQ9NPE2 291 aaKnown RBP21.35■■□□□ 1.01
DNMT1-216ENST00000588952 ACP6Q9NPH0 428 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 DAAM1Q9Y4D1 1078 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 IRAK3Q9Y616 596 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 CDY1Q9Y6F8 540 aa21.35■■□□□ 1.01
DNMT1-216ENST00000588952 MYBPHLA2RUH7 354 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 OR6C75A6NL08 312 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 TEX28O15482 410 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 GOLGA8FQ08AF8 430 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 GOLGA8DPQ0D2H9 430 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 ZNF697Q5TEC3 545 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 E4F1Q66K89 784 aaPredicted RBP21.34■■□□□ 1.01
DNMT1-216ENST00000588952 SLC8B1Q6J4K2 584 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 PDXDC1Q6P996 788 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 ADGRD2Q7Z7M1 963 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 FAM71AQ8IYT1 594 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 MICAL1Q8TDZ2 1067 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 CPLX3Q8WVH0 158 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 KLHL5Q96PQ7 755 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 NUP58Q9BVL2 599 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 NT5C1AQ9BXI3 368 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 FNIP2Q9P278 1114 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 CDH9Q9ULB4 789 aa21.34■■□□□ 1.01
DNMT1-216ENST00000588952 A0A1W2PQJ5 194 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 CYP26A1O43174 497 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 VNN2O95498 520 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 PTPN1P18031 435 aaKnown RBP21.33■■□□□ 1.01
DNMT1-216ENST00000588952 PCSK1P29120 753 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 CDC25BP30305 580 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 CASP14P31944 242 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 OR1D2P34982 312 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 USP8P40818 1118 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 ARPP19P56211 112 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 ROR1Q01973 937 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 ADGRE1Q14246 886 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 CACNA2D4Q7Z3S7 1137 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 CRYBG2Q8N1P7 616 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 TTC39CQ8N584 583 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 C12orf29Q8N999 325 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 B3GALNT2Q8NCR0 500 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 MRPL38Q96DV4 380 aaKnown RBP21.33■■□□□ 1.01
DNMT1-216ENST00000588952 TMEM176AQ96HP8 235 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 SPAG5Q96R06 1193 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 ZSWIM1Q9BR11 485 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.33■■□□□ 1.01
DNMT1-216ENST00000588952 GTF3C4Q9UKN8 822 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 CAPN11Q9UMQ6 739 aa21.33■■□□□ 1.01
DNMT1-216ENST00000588952 SSX2IPQ9Y2D8 614 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms