RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 TADA2AO75478 443 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 FGBP02675 491 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 TNNT1P13805 278 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 ARHGAP25P42331 645 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 OR1G1P47890 313 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 GALCP54803 685 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 NAP1L1P55209 391 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 TCEAL1Q15170 157 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 LIN9Q5TKA1 542 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 PSRC1Q6PGN9 363 aaPredicted RBP11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 LCLAT1Q6UWP7 414 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 KIF18AQ8NI77 898 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 C16orf45Q96MC5 204 aaPredicted RBP11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 MRPL45Q9BRJ2 306 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 OXCT2Q9BYC2 517 aaPredicted RBP11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 ACP6Q9NPH0 428 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 HESX1Q9UBX0 185 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 LCMT1Q9UIC8 334 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 L1RE1Q9UN81 338 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 FAN1Q9Y2M0 1017 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 DGKIO75912 1065 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 DDHD2O94830 711 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 CALB1P05937 261 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 CDH5P33151 784 aaPredicted RBP11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 SLC8A3P57103 927 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 GNG11P61952 73 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 MAPRE1Q15691 268 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 TIGD5Q53EQ6 642 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 ARHGAP17Q68EM7 881 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 PHF13Q86YI8 300 aaPredicted RBP11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 KBTBD7Q8WVZ9 684 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 PCDHB18PQ96TA0 734 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 ACBD6Q9BR61 282 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 LACRTQ9GZZ8 138 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 STK39Q9UEW8 545 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 CDH9Q9ULB4 789 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 STRIP2Q9ULQ0 834 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 PCDHB8Q9UN66 801 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 PAXBP1Q9Y5B6 917 aa11.23□□□□□ -0.61
NEDD4L-224ENST00000588712 MICAL3Q7RTP6 2002 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 TET1Q8NFU7 2136 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 TMCO5BA8MYB1 307 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 SYN3O14994 580 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 SETSIPP0DME0 302 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 ITGB8P26012 769 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 ALDH7A1P49419 539 aaKnown RBP11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 C1QBPQ07021 282 aaKnown RBP11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 TCTN1Q2MV58 587 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 WSCD1Q658N2 575 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 OLIG1Q8TAK6 271 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 CYFIP2Q96F07 1278 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 MTIF3Q9H2K0 278 aaKnown RBP11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 NRDE2Q9H7Z3 1164 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 MRPL47Q9HD33 250 aaKnown RBP11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 UVRAGQ9P2Y5 699 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 GTF3C4Q9UKN8 822 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 DNAH12Q6ZR08 3092 aa11.22□□□□□ -0.61
NEDD4L-224ENST00000588712 O00370 1275 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 NOMO3P69849 1222 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 ACOT1Q86TX2 421 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 CMTR2Q8IYT2 770 aaKnown RBP11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 SYCE1Q8N0S2 351 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 TMEM130Q8N3G9 435 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 STK32AQ8WU08 396 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 RFFLQ8WZ73 363 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 TFAP2BQ92481 460 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 TWNKQ96RR1 684 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 RRAGDQ9NQL2 400 aaPredicted RBP11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 AVENQ9NQS1 362 aaPredicted RBP11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 DDX43Q9NXZ2 648 aaKnown RBP11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 ADAM22Q9P0K1 906 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 WDR35Q9P2L0 1181 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 ADAM28Q9UKQ2 775 aa11.21□□□□□ -0.61
NEDD4L-224ENST00000588712 NRP1O14786 923 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 UPP2O95045 317 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 PTPN1P18031 435 aaKnown RBP11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 CASQ1P31415 396 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 NOP2P46087 812 aaKnown RBP11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 HADHBP55084 474 aaKnown RBP11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 WDR5P61964 334 aaKnown RBP11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 TAP1Q03518 808 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 TUBB2AQ13885 445 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 ZNF569Q5MCW4 686 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 NAA35Q5VZE5 725 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 OVOS1Q6IE37 1185 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 ERICH1Q86X53 443 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 MCOLN2Q8IZK6 566 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 B3GALNT2Q8NCR0 500 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 C3orf58Q8NDZ4 430 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 PHOSPHO2Q8TCD6 241 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 VWCEQ96DN2 955 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 PAAF1Q9BRP4 392 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 TUBB2BQ9BVA1 445 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 THAP2Q9H0W7 228 aa11.21□□□□□ -0.62
NEDD4L-224ENST00000588712 SCINQ9Y6U3 715 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms