RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 ACP6Q9NPH0 428 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 AVENQ9NQS1 362 aaPredicted RBP11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 UVRAGQ9P2Y5 699 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 GTF3C4Q9UKN8 822 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 TFR2Q9UP52 801 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 ATP11BQ9Y2G3 1177 aa11.17□□□□□ -0.62
CHMP1B-202ENST00000588284 NCANO14594 1321 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 CCDC85CA6NKD9 419 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 MEIS3P2A8K0S8 358 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 A8MXQ7 604 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 PPEF2O14830 753 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 BUB1O43683 1085 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 POMCP01189 267 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 CYP1A2P05177 515 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 CALB1P05937 261 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 CLTBP09497 229 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 ABCB4P21439 1286 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 WARSP23381 471 aaKnown RBP11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 CDH5P33151 784 aaPredicted RBP11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 RAP1GAPP47736 663 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 LHX1P48742 406 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 IKBKEQ14164 716 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 GPNMBQ14956 572 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 SOWAHAQ2M3V2 549 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 NAA35Q5VZE5 725 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 METTL23Q86XA0 190 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 MCOLN2Q8IZK6 566 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 ABI1Q8IZP0 508 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 SLC35G2Q8TBE7 412 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 SENP8Q96LD8 212 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 ELOVL4Q9GZR5 314 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 THAP2Q9H0W7 228 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 MRPL47Q9HD33 250 aaKnown RBP11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 RNF19AQ9NV58 838 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 TAS2R14Q9NYV8 317 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 ADAM22Q9P0K1 906 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 CTTNBP2NLQ9P2B4 639 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 LCMT1Q9UIC8 334 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 DSEQ9UL01 958 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 TBX21Q9UL17 535 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 PCDHGC5Q9Y5F6 944 aa11.16□□□□□ -0.62
CHMP1B-202ENST00000588284 PALMO75781 387 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 MTA2O94776 668 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 IBSPP21815 317 aaPredicted RBP11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 BRD2P25440 801 aaKnown RBP11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 CLCNKBP51801 687 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 CCL23P55773 120 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 TUBB4BP68371 445 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 NOMO3P69849 1222 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 UPP1Q16831 310 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 PAPD7Q5XG87 772 aaKnown RBP11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 CNKSR3Q6P9H4 555 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 LCLAT1Q6UWP7 414 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 ERICH1Q86X53 443 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 PALB2Q86YC2 1186 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 TPCN2Q8NHX9 752 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 LINC01599Q8WXQ3 324 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 CPA5Q8WXQ8 436 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 TFAP2BQ92481 460 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 ZNF653Q96CK0 615 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 MRPL45Q9BRJ2 306 aaKnown RBP11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 PPP1R12CQ9BZL4 782 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 L2HGDHQ9H9P8 463 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 GOLGA2P5Q9HBQ8 144 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 WDR35Q9P2L0 1181 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 HESX1Q9UBX0 185 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 CNOT8Q9UFF9 292 aaKnown RBP11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 SALL4Q9UJQ4 1053 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 CDC23Q9UJX2 597 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 STRIP2Q9ULQ0 834 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 INPP5FQ9Y2H2 1132 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 SAR1BQ9Y6B6 198 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 SCINQ9Y6U3 715 aa11.15□□□□□ -0.62
CHMP1B-202ENST00000588284 TRIP11Q15643 1979 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 C2orf72A6NCS6 295 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 SPTLC1O15269 473 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 TRAPPC3O43617 180 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 EFCAB14O75071 495 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 B3GAT3O94766 335 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 TIMP1P01033 207 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 CALCAP01258 141 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 ALDH2P05091 517 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 SETSIPP0DME0 302 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 TCP1P17987 556 aaKnown RBP11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 MMP8P22894 467 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 CYP2C18P33260 490 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 AARSP49588 968 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 TAP1Q03518 808 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 RNASELQ05823 741 aaKnown RBP11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 ARHGAP17Q68EM7 881 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 TMEM92Q6UXU6 159 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 SLFN11Q7Z7L1 901 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 NPAS4Q8IUM7 802 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 ADGRF2Q8IZF7 708 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 TMEM130Q8N3G9 435 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 DIS3LQ8TF46 1054 aaKnown RBP11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 SCLYQ96I15 445 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 TWNKQ96RR1 684 aa11.14□□□□□ -0.63
CHMP1B-202ENST00000588284 COLEC11Q9BWP8 271 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms