RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-205ENST00000587888 KPNA7A9QM74 516 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 HAPLN1P10915 354 aaPredicted RBP15.28■□□□□ 0.04
ERCC1-205ENST00000587888 CDC25CP30307 473 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 LMNB2Q03252 620 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 DGKKQ5KSL6 1271 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 LAIR1Q6GTX8 287 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 C1orf228Q6PIY5 440 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 DCP1BQ8IZD4 617 aaKnown RBP15.28■□□□□ 0.04
ERCC1-205ENST00000587888 FAM213AQ9BRX8 229 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 ST6GALNAC4Q9H4F1 302 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 MRPL44Q9H9J2 332 aaKnown RBP15.28■□□□□ 0.04
ERCC1-205ENST00000587888 IL21Q9HBE4 155 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 GKN1Q9NS71 199 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 C2orf42Q9NWW7 574 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 OBP2AQ9NY56 170 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 CCDC39Q9UFE4 941 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 ZNF292O60281 2723 aa15.28■□□□□ 0.04
ERCC1-205ENST00000587888 SCN1AP35498 2009 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 ADSSP30520 456 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 HOXC13P31276 330 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 TFAMQ00059 246 aaKnown RBP15.27■□□□□ 0.04
ERCC1-205ENST00000587888 CEBPZQ03701 1054 aaKnown RBP15.27■□□□□ 0.04
ERCC1-205ENST00000587888 KCNA1Q09470 495 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 POSTNQ15063 836 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 SV2CQ496J9 727 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 RRAGBQ5VZM2 374 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 EFCAB13Q8IY85 973 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 MAB21L3Q8N8X9 362 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 SPPL2BQ8TCT7 592 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 NOC3LQ8WTT2 800 aaKnown RBP15.27■□□□□ 0.04
ERCC1-205ENST00000587888 C2orf15Q8WU43 125 aaKnown RBP15.27■□□□□ 0.04
ERCC1-205ENST00000587888 PI4K2AQ9BTU6 479 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 PANK2Q9BZ23 570 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 TMLHEQ9NVH6 421 aa15.27■□□□□ 0.04
ERCC1-205ENST00000587888 MAGED2Q9UNF1 606 aaPredicted RBP15.27■□□□□ 0.04
ERCC1-205ENST00000587888 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.27■□□□□ 0.04
ERCC1-205ENST00000587888 DCHS1Q96JQ0 3298 aa15.27■□□□□ 0.03
ERCC1-205ENST00000587888 OTOGLQ3ZCN5 2332 aa15.27■□□□□ 0.03
ERCC1-205ENST00000587888 MYMKA6NI61 221 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 K7ESF4 209 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 PRPF40AO75400 957 aaKnown RBP15.26■□□□□ 0.03
ERCC1-205ENST00000587888 IL18RAPO95256 599 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 GPR15P49685 360 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 WNT7BP56706 349 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 PLCB2Q00722 1185 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 SMARCB1Q12824 385 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 ITPRIPL2Q3MIP1 535 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 SV2BQ7L1I2 683 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 LONP2Q86WA8 852 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 CMTM8Q8IZV2 173 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 STKLD1Q8NE28 680 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 ZSWIM2Q8NEG5 633 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 CLIC6Q96NY7 704 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 ACCSQ96QU6 501 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 AGAP1Q9UPQ3 857 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 EXOC7Q9UPT5 735 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 PCDHB5Q9Y5E4 795 aa15.26■□□□□ 0.03
ERCC1-205ENST00000587888 TCHHQ07283 1943 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 GCNT3O95395 438 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 F11P03951 625 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 RETP07949 1114 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 IDEP14735 1019 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 WEE1P30291 646 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 POLR2BP30876 1174 aaKnown RBP15.25■□□□□ 0.03
ERCC1-205ENST00000587888 AVPR1AP37288 418 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 NLRP12P59046 1061 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 POU5F1Q01860 360 aaKnown RBP15.25■□□□□ 0.03
ERCC1-205ENST00000587888 PTPAQ15257 358 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 SDHAF4Q5VUM1 108 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 TXNDC8Q6A555 127 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 SCARA3Q6AZY7 606 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 TRIM68Q6AZZ1 485 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 FAM173BQ6P4H8 233 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 CEP68Q76N32 757 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.25■□□□□ 0.03
ERCC1-205ENST00000587888 TMEM150AQ86TG1 271 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 SYCP3Q8IZU3 236 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 CSGALNACT2Q8N6G5 542 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 HVCN1Q96D96 273 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 ZNF560Q96MR9 790 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 RTKNQ9BST9 563 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 EBF3Q9H4W6 596 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 PCIF1Q9H4Z3 704 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 STK17AQ9UEE5 414 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 FBXO2Q9UK22 296 aaPredicted RBP15.25■□□□□ 0.03
ERCC1-205ENST00000587888 CCL26Q9Y258 94 aa15.25■□□□□ 0.03
ERCC1-205ENST00000587888 KIF26AQ9ULI4 1882 aaPredicted RBP15.25■□□□□ 0.03
ERCC1-205ENST00000587888 TSC2P49815 1807 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 F5P12259 2224 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.24■□□□□ 0.03
ERCC1-205ENST00000587888 GOLGA8IPA6NC78 632 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 GOLGA8JA6NMD2 632 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 EXTL3O43909 919 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 ITGB3P05106 788 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 KRT19P08727 400 aa15.24■□□□□ 0.03
ERCC1-205ENST00000587888 HMGA1P17096 107 aaKnown RBP15.24■□□□□ 0.03
ERCC1-205ENST00000587888 ACAT1P24752 427 aaKnown RBP15.24■□□□□ 0.03
ERCC1-205ENST00000587888 CNR2P34972 360 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms