RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 ZNF606Q8WXB4 792 aa19.58■□□□□ 0.73
DDX39A-206ENST00000587730 APOBEC3GQ9HC16 384 aaKnown RBP19.58■□□□□ 0.73
DDX39A-206ENST00000587730 POC1B-GALNT4F8VUJ3 575 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 TYROBPO43914 113 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 KRT7P08729 469 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 SUPT20HL2P0C7V6 817 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 EIF4BP23588 611 aaKnown RBP19.58■□□□□ 0.72
DDX39A-206ENST00000587730 GJC1P36383 396 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 RFC5P40937 340 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 ACTR2P61160 394 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 YWHAEP62258 255 aaKnown RBP19.58■□□□□ 0.72
DDX39A-206ENST00000587730 NAA25Q14CX7 972 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 SEPT7Q16181 437 aaKnown RBP19.58■□□□□ 0.72
DDX39A-206ENST00000587730 SUPT20HL1Q3ZLR7 823 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 WASHC2DQ5SRD0 308 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 WDR78Q5VTH9 848 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 MFSD7Q6UXD7 560 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 PASD1Q8IV76 773 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 PPIL6Q8IXY8 311 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 KIF2BQ8N4N8 673 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 UBR7Q8N806 425 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 ERP27Q96DN0 273 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 MYLK2Q9H1R3 596 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 SUFUQ9UMX1 484 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 L3MBTL1Q9Y468 752 aa19.58■□□□□ 0.72
DDX39A-206ENST00000587730 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.58■□□□□ 0.72
DDX39A-206ENST00000587730 ARID2Q68CP9 1835 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 YY1P25490 414 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 POLR2BP30876 1174 aaKnown RBP19.57■□□□□ 0.72
DDX39A-206ENST00000587730 CDH5P33151 784 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-206ENST00000587730 DNAJC3Q13217 504 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 CMPK2Q5EBM0 449 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 FAM47EQ6ZV65 393 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 PHLDB2Q86SQ0 1253 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 WDR49Q8IV35 697 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 ZBED8Q8IZ13 594 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 SLC35B2Q8TB61 432 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 PRCCQ92733 491 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-206ENST00000587730 FHDC1Q9C0D6 1143 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-206ENST00000587730 RPAP3Q9H6T3 665 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-206ENST00000587730 PCDHGC3Q9UN70 934 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 PPME1Q9Y570 386 aa19.57■□□□□ 0.72
DDX39A-206ENST00000587730 TCRBV5S1A1TA0A578 114 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 SPATA31C2B4DYI2 1134 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 C2CD2LO14523 706 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 CALCAP01258 141 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 RPSAP08865 295 aaKnown RBP19.56■□□□□ 0.72
DDX39A-206ENST00000587730 CDKN2BP42772 138 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 PKN2Q16513 984 aaKnown RBP19.56■□□□□ 0.72
DDX39A-206ENST00000587730 SPOPLQ6IQ16 392 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 ZPBP2Q6X784 338 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 TEX9Q8N6V9 391 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 SLC7A3Q8WY07 619 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 VPS11Q9H270 941 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 LNPEPQ9UIQ6 1025 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 ZNRF3Q9ULT6 936 aa19.56■□□□□ 0.72
DDX39A-206ENST00000587730 SGK1O00141 431 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 DIAPH2O60879 1101 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 ASS1P00966 412 aaKnown RBP19.55■□□□□ 0.72
DDX39A-206ENST00000587730 ARL2P36404 184 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 ACOT2P49753 483 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 PDIA2Q13087 525 aaKnown RBP19.55■□□□□ 0.72
DDX39A-206ENST00000587730 HADHQ16836 314 aaKnown RBP19.55■□□□□ 0.72
DDX39A-206ENST00000587730 KAZNQ674X7 775 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 LLGL2Q6P1M3 1020 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 CDAN1Q8IWY9 1227 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 THNSL1Q8IYQ7 743 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 FNIP1Q8TF40 1166 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 DHX33Q9H6R0 707 aaKnown RBP19.55■□□□□ 0.72
DDX39A-206ENST00000587730 RNPEPL1Q9HAU8 725 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 SLC5A4Q9NY91 659 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 CHKBQ9Y259 395 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 FARP1Q9Y4F1 1045 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-206ENST00000587730 NUB1Q9Y5A7 615 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 IVNS1ABPQ9Y6Y0 642 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 ADGRA2Q96PE1 1338 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 CNTNAP2Q9UHC6 1331 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 SPAG7O75391 227 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 KRT10P13645 584 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 SOX10P56693 466 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 MTERF2Q49AM1 385 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 C2CD6Q53TS8 623 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 PPP1R15BQ5SWA1 713 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 LMBRD2Q68DH5 695 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-206ENST00000587730 SEPT14Q6ZU15 432 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 CCDC60Q8IWA6 550 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-206ENST00000587730 BRSK2Q8IWQ3 736 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 PYROXD1Q8WU10 500 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 C10orf82Q8WW14 230 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 DHRS4Q9BTZ2 278 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 ACSS3Q9H6R3 686 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 AS3MTQ9HBK9 375 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 ANKFY1Q9P2R3 1169 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 SNCAIPQ9Y6H5 919 aa19.55■□□□□ 0.72
DDX39A-206ENST00000587730 LRRD1A4D1F6 860 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 FOXO6A8MYZ6 492 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 E7ESA3 106 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 SPAG6O75602 509 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 OATP04181 439 aa19.54■□□□□ 0.72
DDX39A-206ENST00000587730 CALB2P22676 271 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms