RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 KRT5P13647 590 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 CPB1P15086 417 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 RPL17P18621 184 aaKnown RBP14.53□□□□□ -0.08
VMP1-203ENST00000586245 ACAT1P24752 427 aaKnown RBP14.53□□□□□ -0.08
VMP1-203ENST00000586245 LMO2P25791 158 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 KLRC2P26717 231 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 OR1D2P34982 312 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 PBX1P40424 430 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 NDUFV1P49821 464 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 ZNF75DP51815 510 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 ARPP19P56211 112 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 SMYD5Q6GMV2 418 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 SLC8B1Q6J4K2 584 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 GLYCTKQ8IVS8 523 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 DCP1BQ8IZD4 617 aaKnown RBP14.53□□□□□ -0.08
VMP1-203ENST00000586245 IQCDQ96DY2 449 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 KLHL5Q96PQ7 755 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 SPAG5Q96R06 1193 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 RTP3Q9BQQ7 232 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 SYT15Q9BQS2 421 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 CLSTN3Q9BQT9 956 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 NT5C1AQ9BXI3 368 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 STK33Q9BYT3 514 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 NLRC4Q9NPP4 1024 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 CEP72Q9P209 647 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 PCDHGC5Q9Y5F6 944 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.53□□□□□ -0.08
VMP1-203ENST00000586245 VWA8A3KMH1 1905 aa14.53□□□□□ -0.08
VMP1-203ENST00000586245 TSC2P49815 1807 aa14.52□□□□□ -0.08
VMP1-203ENST00000586245 ITIH6Q6UXX5 1313 aa14.52□□□□□ -0.08
VMP1-203ENST00000586245 EPHB6O15197 1021 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 TEX28O15482 410 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 HCRTO43612 131 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 TBC1D4O60343 1298 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 ACO1P21399 889 aaKnown RBP14.52□□□□□ -0.09
VMP1-203ENST00000586245 IGFBP4P22692 258 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 USP8P40818 1118 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 DRAP1Q14919 205 aaPredicted RBP14.52□□□□□ -0.09
VMP1-203ENST00000586245 MAPRE1Q15691 268 aaKnown RBP14.52□□□□□ -0.09
VMP1-203ENST00000586245 ZNF394Q53GI3 561 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 INTS6LQ5JSJ4 861 aaKnown RBP14.52□□□□□ -0.09
VMP1-203ENST00000586245 SPECC1LQ69YQ0 1117 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 TMEM270Q6UE05 265 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 UBR7Q8N806 425 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 RBBP8NLQ8NC74 664 aaPredicted RBP14.52□□□□□ -0.09
VMP1-203ENST00000586245 B3GALNT2Q8NCR0 500 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 OR10T2Q8NGX3 314 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 TMEM176AQ96HP8 235 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 TMEM209Q96SK2 561 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 NAA15Q9BXJ9 866 aaKnown RBP14.52□□□□□ -0.09
VMP1-203ENST00000586245 ZCWPW1Q9H0M4 648 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 NSUN3Q9H649 340 aaKnown RBP14.52□□□□□ -0.09
VMP1-203ENST00000586245 GRPEL1Q9HAV7 217 aa14.52□□□□□ -0.09
VMP1-203ENST00000586245 AJAP1Q9UKB5 411 aaPredicted RBP14.52□□□□□ -0.09
VMP1-203ENST00000586245 FSD2A1L4K1 749 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 TPM1P09493 284 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 OR4Q2P0C623 313 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 PTPN1P18031 435 aaKnown RBP14.51□□□□□ -0.09
VMP1-203ENST00000586245 PSMC1P62191 440 aaKnown RBP14.51□□□□□ -0.09
VMP1-203ENST00000586245 ROR1Q01973 937 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 SMARCB1Q12824 385 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 ORC1Q13415 861 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 RAB33AQ14088 237 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 TRIM14Q14142 442 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 SLC39A12Q504Y0 691 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 FIGNQ5HY92 759 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 RSPO2Q6UXX9 243 aaPredicted RBP14.51□□□□□ -0.09
VMP1-203ENST00000586245 Q7L0L9 218 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 ACOT1Q86TX2 421 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 RBM23Q86U06 439 aaKnown RBP14.51□□□□□ -0.09
VMP1-203ENST00000586245 PPFIBP1Q86W92 1011 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 VSTM4Q8IW00 320 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 CRYBG2Q8N1P7 616 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 DEFB123Q8N688 67 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 ZNF397Q8NF99 534 aaPredicted RBP14.51□□□□□ -0.09
VMP1-203ENST00000586245 WHAMMQ8TF30 809 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 SHC3Q92529 594 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 MRFAP1L1Q96HT8 127 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 CDCA3Q99618 268 aaPredicted RBP14.51□□□□□ -0.09
VMP1-203ENST00000586245 EDEM3Q9BZQ6 932 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 DPEP3Q9H4B8 488 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 TLE6Q9H808 572 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 HMGXB4Q9UGU5 601 aa14.51□□□□□ -0.09
VMP1-203ENST00000586245 CHD7Q9P2D1 2997 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 WDR27A2RRH5 827 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 F8VZ95 297 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 FOXN3O00409 490 aaPredicted RBP14.5□□□□□ -0.09
VMP1-203ENST00000586245 ADAM12O43184 909 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 ATP2C2O75185 946 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 PAEPP09466 180 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 STAT1P42224 750 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 FXR1P51114 621 aaKnown RBP eCLIP14.5□□□□□ -0.09
VMP1-203ENST00000586245 RAD23BP54727 409 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 GPR17Q13304 367 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 GSE1Q14687 1217 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 NFE2Q16621 373 aaPredicted RBP14.5□□□□□ -0.09
VMP1-203ENST00000586245 MDH1BQ5I0G3 518 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 TPGS2Q68CL5 300 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 C4orf50Q6ZRC1 276 aa14.5□□□□□ -0.09
VMP1-203ENST00000586245 PALB2Q86YC2 1186 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms