RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 CATSPER4Q7RTX7 472 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 CDR2LQ86X02 465 aaPredicted RBP6.17□□□□□ -1.42
CDH8-213ENST00000584966 CEP57L1Q8IYX8 460 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 TDHQ8IZJ6 230 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 KIAA0895Q8NCT3 520 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 SMG8Q8ND04 991 aaKnown RBP6.17□□□□□ -1.42
CDH8-213ENST00000584966 DEPTORQ8TB45 409 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 ERCC4Q92889 916 aaPredicted RBP6.17□□□□□ -1.42
CDH8-213ENST00000584966 ZNF689Q96CS4 500 aaPredicted RBP6.17□□□□□ -1.42
CDH8-213ENST00000584966 ZBTB45Q96K62 511 aaPredicted RBP6.17□□□□□ -1.42
CDH8-213ENST00000584966 GBP4Q96PP9 640 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 FTHL17Q9BXU8 183 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 OSBPL1AQ9BXW6 950 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 CXCL16Q9H2A7 254 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 PDZD7Q9H5P4 517 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 PRMT7Q9NVM4 692 aaPredicted RBP6.17□□□□□ -1.42
CDH8-213ENST00000584966 TBC1D7Q9P0N9 293 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 LARSQ9P2J5 1176 aaKnown RBP6.17□□□□□ -1.42
CDH8-213ENST00000584966 KANSL3Q9P2N6 904 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 SEL1LQ9UBV2 794 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 KCNG1Q9UIX4 513 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 TBX20Q9UMR3 447 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 PHLPP2Q6ZVD8 1323 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 ZMYM2Q9UBW7 1377 aa6.17□□□□□ -1.42
CDH8-213ENST00000584966 MTCL1Q9Y4B5 1905 aaKnown RBP6.17□□□□□ -1.42
CDH8-213ENST00000584966 C5orf42Q9H799 3197 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 A0A1W2PPC1 479 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 TISP43B9A030 160 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 K7ENM7 598 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 SOX1O00570 391 aaPredicted RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 FSCN2O14926 492 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 TGFB1I1O43294 461 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 EFCAB14O75071 495 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 ADAM11O75078 769 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 TBCAO75347 108 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 DGKIO75912 1065 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 PRPF6O94906 941 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 RHOBTB3O94955 611 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 GJB5O95377 273 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 PRNPP04156 253 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 RPN1P04843 607 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 ACTN1P12814 892 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 IDEP14735 1019 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 DNAJA1P31689 397 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 SOX18P35713 384 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 GATMP50440 423 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 RABGGTBP53611 331 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 PRPF4BQ13523 1007 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 KCNB1Q14721 858 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 MAPK6Q16659 721 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 BMT2Q1RMZ1 405 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 LRIT3Q3SXY7 679 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 L1TD1Q5T7N2 865 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 ZPBP2Q6X784 338 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 AGMOQ6ZNB7 445 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 LRRC55Q6ZSA7 311 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 ECHDC2Q86YB7 292 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 HERC6Q8IVU3 1022 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 ZBTB8OSQ8IWT0 167 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 FAM178BQ8IXR5 827 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 CCDC65Q8IXS2 484 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 GSTCDQ8NEC7 633 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 ZSWIM2Q8NEG5 633 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 PHOSPHO2Q8TCD6 241 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 SCFD1Q8WVM8 642 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 RNPC3Q96LT9 517 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 SCLT1Q96NL6 688 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 TARS2Q9BW92 718 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 ZHX3Q9H4I2 956 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 ELAC1Q9H777 363 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 MRPL44Q9H9J2 332 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 SLC39A2Q9NP94 309 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 C1orf112Q9NSG2 853 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 FAM105AQ9NUU6 356 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 MIOSQ9NXC5 875 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 PIN4Q9Y237 131 aaKnown RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 TNFSF13BQ9Y275 285 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 PCDHA5Q9Y5H7 936 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 STYXL1Q9Y6J8 313 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 SLC4A7Q9Y6M7 1214 aa6.16□□□□□ -1.42
CDH8-213ENST00000584966 COL4A4P53420 1690 aaPredicted RBP6.16□□□□□ -1.42
CDH8-213ENST00000584966 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.15□□□□□ -1.42
CDH8-213ENST00000584966 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.15□□□□□ -1.42
CDH8-213ENST00000584966 LCHNA4D1U4 455 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 INPPL1O15357 1258 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 EIF3DO15371 548 aaKnown RBP eCLIP6.15□□□□□ -1.42
CDH8-213ENST00000584966 OFD1O75665 1012 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 KIF4AO95239 1232 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 NPTXRO95502 500 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 EOMESO95936 686 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 AMHP03971 560 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 ADRB2P07550 413 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 MYOGP15173 224 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 ATP2A2P16615 1042 aaKnown RBP6.15□□□□□ -1.42
CDH8-213ENST00000584966 ZSCAN20P17040 1043 aaPredicted RBP6.15□□□□□ -1.42
CDH8-213ENST00000584966 SCP2P22307 547 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 ATP11AP98196 1134 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 MCL1Q07820 350 aa6.15□□□□□ -1.42
CDH8-213ENST00000584966 MORC3Q14149 939 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms