RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 VNN1O95497 513 aa11.91□□□□□ -0.5
TOP3A-217ENST00000584582 ATP2A2P16615 1042 aaKnown RBP11.91□□□□□ -0.5
TOP3A-217ENST00000584582 C15orf59Q2T9L4 293 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-217ENST00000584582 LRRC34Q8IZ02 419 aa11.91□□□□□ -0.5
TOP3A-217ENST00000584582 SPATA18Q8TC71 538 aa11.91□□□□□ -0.5
TOP3A-217ENST00000584582 FAF2Q96CS3 445 aa11.91□□□□□ -0.5
TOP3A-217ENST00000584582 CHMP6Q96FZ7 201 aa11.91□□□□□ -0.5
TOP3A-217ENST00000584582 XPO6Q96QU8 1125 aaKnown RBP11.91□□□□□ -0.5
TOP3A-217ENST00000584582 SMC6Q96SB8 1091 aa11.91□□□□□ -0.5
TOP3A-217ENST00000584582 SNTG2Q9NY99 539 aa11.91□□□□□ -0.5
TOP3A-217ENST00000584582 TIMM13Q9Y5L4 95 aaPredicted RBP11.91□□□□□ -0.5
TOP3A-217ENST00000584582 NHSQ6T4R5 1651 aa11.91□□□□□ -0.5
TOP3A-217ENST00000584582 NCANO14594 1321 aa11.91□□□□□ -0.5
TOP3A-217ENST00000584582 PRRC2BQ5JSZ5 2229 aaKnown RBP11.9□□□□□ -0.5
TOP3A-217ENST00000584582 A6NJR5 290 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 FZD9O00144 591 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 PDHXO00330 501 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 CSPG5O95196 566 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 APRTP07741 180 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 OTUD4Q01804 1114 aaKnown RBP11.9□□□□□ -0.5
TOP3A-217ENST00000584582 DUPD1Q68J44 220 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 ZC3H3Q8IXZ2 948 aaKnown RBP11.9□□□□□ -0.5
TOP3A-217ENST00000584582 P3H4Q92791 437 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 A0A087WUV0 522 aaPredicted RBP11.9□□□□□ -0.5
TOP3A-217ENST00000584582 A6NNZ2 444 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 ZBED1O96006 694 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 YY1P25490 414 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 MAGEA4P43358 317 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 SLC8A3P57103 927 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 NOMO3P69849 1222 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 TUBB8Q3ZCM7 444 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 KDM7AQ6ZMT4 941 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 RIOX2Q8IUF8 465 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 BRSK2Q8IWQ3 736 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 JOSD2Q8TAC2 188 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 TFAP2BQ92481 460 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 LPIN3Q9BQK8 851 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 TRAIPQ9BWF2 469 aa11.9□□□□□ -0.5
TOP3A-217ENST00000584582 DHX33Q9H6R0 707 aaKnown RBP11.9□□□□□ -0.5
TOP3A-217ENST00000584582 C4BPAP04003 597 aaKnown RBP11.9□□□□□ -0.51
TOP3A-217ENST00000584582 MYBL1P10243 752 aa11.9□□□□□ -0.51
TOP3A-217ENST00000584582 OAZ1P54368 228 aa11.9□□□□□ -0.51
TOP3A-217ENST00000584582 TRIM72Q6ZMU5 477 aa11.9□□□□□ -0.51
TOP3A-217ENST00000584582 SLFN11Q7Z7L1 901 aa11.9□□□□□ -0.51
TOP3A-217ENST00000584582 PDIK1LQ8N165 341 aa11.9□□□□□ -0.51
TOP3A-217ENST00000584582 TTC17Q96AE7 1141 aa11.9□□□□□ -0.51
TOP3A-217ENST00000584582 ATXN7L3BQ96GX2 97 aa11.9□□□□□ -0.51
TOP3A-217ENST00000584582 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.51
TOP3A-217ENST00000584582 CDT1Q9H211 546 aa11.9□□□□□ -0.51
TOP3A-217ENST00000584582 ASB14A6NK59 587 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 SLC25A27O95847 323 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 GH1P01241 217 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 C6orf222P0C671 652 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-217ENST00000584582 SLC1A1P43005 524 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 NDST1P52848 882 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 SNRPFP62306 86 aaKnown RBP11.89□□□□□ -0.51
TOP3A-217ENST00000584582 BEX3Q00994 111 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 CELF3Q5SZQ8 465 aaKnown RBP11.89□□□□□ -0.51
TOP3A-217ENST00000584582 CENPUQ71F23 418 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 PPM1NQ8N819 430 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 UBXN6Q9BZV1 441 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 DCLK3Q9C098 648 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 RAB6BQ9NRW1 208 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 TXNDC16Q9P2K2 825 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 STXBP5LQ9Y2K9 1186 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 KAT6AQ92794 2004 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 KCNN4O15554 427 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 RIPK2O43353 540 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 CELF2O95319 508 aaKnown RBP11.89□□□□□ -0.51
TOP3A-217ENST00000584582 CYP1A2P05177 515 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 CYP2C9P11712 490 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 ACAT1P24752 427 aaKnown RBP11.89□□□□□ -0.51
TOP3A-217ENST00000584582 SDC4P31431 198 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 MAN1A1P33908 653 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 BCAR1P56945 870 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 SURF1Q15526 300 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 B3GNT9Q6UX72 402 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 NPNTQ6UXI9 565 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 EFCAB13Q8IY85 973 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 ACO2Q99798 780 aaKnown RBP11.89□□□□□ -0.51
TOP3A-217ENST00000584582 SLC13A1Q9BZW2 595 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 HAPLN2Q9GZV7 340 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 EIF4E1BA6NMX2 242 aaKnown RBP11.89□□□□□ -0.51
TOP3A-217ENST00000584582 BTNL10A8MVZ5 291 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 GPR25O00155 361 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 EDN1P05305 212 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 INHBAP08476 426 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 ITIH2P19823 946 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 SSTR1P30872 391 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 MSH2P43246 934 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 MAGEA9P43362 315 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 GTF2A1P52655 376 aaPredicted RBP11.89□□□□□ -0.51
TOP3A-217ENST00000584582 TAF5Q15542 800 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 KIF2BQ8N4N8 673 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 LRRC8CQ8TDW0 803 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 AGAP3Q96P47 875 aa11.89□□□□□ -0.51
TOP3A-217ENST00000584582 TGS1Q96RS0 853 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms