RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CASP4P49662 377 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 EPHA5P54756 1037 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 TRPC3Q13507 836 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 KCNB1Q14721 858 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 VEPH1Q14D04 833 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 SOWAHAQ2M3V2 549 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 DNAJB7Q7Z6W7 309 aaPredicted RBP21.92■■□□□ 1.1
SS18-224ENST00000584083 ITIH5Q86UX2 942 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 SLC9A9Q8IVB4 645 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 FMR1NBQ8N0W7 255 aaPredicted RBP21.92■■□□□ 1.1
SS18-224ENST00000584083 SPATA18Q8TC71 538 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 GPR152Q8TDT2 470 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 ZNF516Q92618 1163 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 MMS19Q96T76 1030 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 ACBD6Q9BR61 282 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 KCNH6Q9H252 994 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 CA14Q9ULX7 337 aa21.92■■□□□ 1.1
SS18-224ENST00000584083 STK25O00506 426 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 RFX1P22670 979 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 PCSK1P29120 753 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 GPC5P78333 572 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 TAF12Q16514 161 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 NFE2Q16621 373 aaPredicted RBP21.91■■□□□ 1.1
SS18-224ENST00000584083 IER5LQ5T953 404 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 CEP135Q66GS9 1140 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 DPH6Q7L8W6 267 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 OSTM1Q86WC4 334 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 PSMG2Q969U7 264 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 FAM122AQ96E09 287 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 SLITRK6Q9H5Y7 841 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 TMLHEQ9NVH6 421 aa21.91■■□□□ 1.1
SS18-224ENST00000584083 A0A1W2PRU2 124 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 NRG2O14511 850 aaPredicted RBP21.9■■□□□ 1.1
SS18-224ENST00000584083 MOSPD3O75425 235 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 HAPLN1P10915 354 aaPredicted RBP21.9■■□□□ 1.1
SS18-224ENST00000584083 BIRC3Q13489 604 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 PNOCQ13519 176 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 TEAD2Q15562 447 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 INTS6LQ5JSJ4 861 aaKnown RBP21.9■■□□□ 1.1
SS18-224ENST00000584083 FAM78AQ5JUQ0 283 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 ASTLQ6HA08 431 aaPredicted RBP21.9■■□□□ 1.1
SS18-224ENST00000584083 POTEHQ6S545 545 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 TMC8Q8IU68 726 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 SHKBP1Q8TBC3 707 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 PARD3BQ8TEW8 1205 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 GIPC2Q8TF65 315 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 LPIN3Q9BQK8 851 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 PI4K2AQ9BTU6 479 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 LRRC3Q9BY71 257 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 GZF1Q9H116 711 aaPredicted RBP21.9■■□□□ 1.1
SS18-224ENST00000584083 SLC2A4RGQ9NR83 387 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 GTF3C4Q9UKN8 822 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 FRMD4BQ9Y2L6 1034 aa21.9■■□□□ 1.1
SS18-224ENST00000584083 GABRDO14764 452 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 ECI2O75521 394 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 CLSTN1O94985 981 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 ATF6P18850 670 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 CLCN5P51795 746 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 TNNC1P63316 161 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 FAM160A1Q05DH4 1040 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 TANGO2Q6ICL3 276 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 GUF1Q8N442 669 aaKnown RBP21.89■■□□□ 1.09
SS18-224ENST00000584083 PLEKHO2Q8TD55 490 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 TMEM174Q8WUU8 243 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 ZSWIM3Q96MP5 696 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 ZFP14Q9HCL3 533 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 ZNF334Q9HCZ1 680 aaPredicted RBP21.89■■□□□ 1.09
SS18-224ENST00000584083 TRAF3IP3Q9Y228 551 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 MUC6Q6W4X9 2439 aa21.89■■□□□ 1.09
SS18-224ENST00000584083 KRBA1A5PL33 1030 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 LRRIQ3A6PVS8 624 aaPredicted RBP21.88■■□□□ 1.09
SS18-224ENST00000584083 HCRTO43612 131 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 FGF19O95750 216 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 PLA2G5P39877 138 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 AP3M2P53677 418 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 MYL6P60660 151 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 WDR72Q3MJ13 1102 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 TMEM105Q8N8V8 129 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 KBTBD7Q8WVZ9 684 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 ELSPBP1Q96BH3 223 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 ASB16Q96NS5 453 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 PRRX2Q99811 253 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 PLA2G2FQ9BZM2 168 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 GPR88Q9GZN0 384 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 ARHGEF3Q9NR81 526 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 RMND1Q9NWS8 449 aa21.88■■□□□ 1.09
SS18-224ENST00000584083 PDGFRBP09619 1106 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 NPR3P17342 541 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 NR2F2P24468 414 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 GABRR2P28476 465 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 SNW1Q13573 536 aaKnown RBP21.87■■□□□ 1.09
SS18-224ENST00000584083 LIMS2Q7Z4I7 341 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 SPATA2LQ8IUW3 424 aaPredicted RBP21.87■■□□□ 1.09
SS18-224ENST00000584083 ENGASEQ8NFI3 743 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 ZSCAN18Q8TBC5 510 aaPredicted RBP21.87■■□□□ 1.09
SS18-224ENST00000584083 SMARCD2Q92925 531 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 SYAP1Q96A49 352 aaPredicted RBP21.87■■□□□ 1.09
SS18-224ENST00000584083 SYT15Q9BQS2 421 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 SNX25Q9H3E2 840 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 ATXN3LQ9H3M9 355 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms