RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 A0A087WZ62 844 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 MROH6A6NGR9 719 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 HMX3A6NHT5 357 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 CLCA1A8K7I4 914 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 K7ESM1 405 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 ASNA1O43681 348 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 TIPRLO75663 272 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 FAM155BO75949 473 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 FSBPO95073 299 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 DDX58O95786 925 aaKnown RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 ITGA5P08648 1049 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 ZNF28P17035 718 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 IL13P35225 146 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 CTXN1P60606 82 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 MEF2AQ02078 507 aaPredicted RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 MAPK7Q13164 816 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 MTM1Q13496 603 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 ALDH1L2Q3SY69 923 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 WDR45BQ5MNZ6 344 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 SPATA1Q5VX52 437 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 FAM124AQ86V42 546 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 C2CD5Q86YS7 1000 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 CCDC117Q8IWD4 279 aaPredicted RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 LGI4Q8N135 537 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 SLC15A4Q8N697 577 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 LILRA3Q8N6C8 439 aaPredicted RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 STPG3Q8N7X2 389 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 CCDC150Q8NCX0 1101 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 SPPL3Q8TCT6 385 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 ADAMTS18Q8TE60 1221 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 AFG1LQ8WV93 481 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 CENPIQ92674 756 aaPredicted RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 LCORQ96JN0 433 aaPredicted RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 WDR92Q96MX6 357 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 TMEM209Q96SK2 561 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 PRPF18Q99633 342 aaKnown RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 EIF2AQ9BY44 585 aaKnown RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 ZNF518BQ9C0D4 1074 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 NECTIN3Q9NQS3 549 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 POLR3BQ9NW08 1133 aaPredicted RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 CDC42EP3Q9UKI2 254 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 RUVBL1Q9Y265 456 aaKnown RBP5.58□□□□□ -1.52
SS18-223ENST00000583595 TBC1D30Q9Y2I9 924 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 ERCC6Q03468 1493 aa5.58□□□□□ -1.52
SS18-223ENST00000583595 A0A1W2PPH5 198 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 ANKRD18BA2A2Z9 1011 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 RRP9O43818 475 aaKnown RBP5.57□□□□□ -1.52
SS18-223ENST00000583595 GPR32O75388 356 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 USP1O94782 785 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 CYP1A1P04798 512 aaPredicted RBP5.57□□□□□ -1.52
SS18-223ENST00000583595 CD1AP06126 327 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 BTF3P20290 206 aaKnown RBP5.57□□□□□ -1.52
SS18-223ENST00000583595 ADD2P35612 726 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 RAD52P43351 418 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 PIK3CGP48736 1102 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 PNLIPRP1P54315 467 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 PRKAA2P54646 552 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 MLLT6P55198 1093 aaPredicted RBP5.57□□□□□ -1.52
SS18-223ENST00000583595 EFEMP1Q12805 493 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 MAP3K12Q12852 859 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 TRPC3Q13507 836 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 SURF1Q15526 300 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 ADCK5Q3MIX3 580 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 SPATS1Q496A3 300 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 GJC2Q5T442 439 aaPredicted RBP5.57□□□□□ -1.52
SS18-223ENST00000583595 EMC10Q5UCC4 262 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 HAUS3Q68CZ6 603 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 GRAMD4Q6IC98 578 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 KLHL17Q6TDP4 642 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 GALNT5Q7Z7M9 940 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 SDR16C5Q8N3Y7 309 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 DTX3Q8N9I9 347 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 SCAMP5Q8TAC9 235 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 CSGALNACT1Q8TDX6 532 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 CFHR4Q92496 578 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 EID2BQ96D98 161 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 RSRC1Q96IZ7 334 aaKnown RBP5.57□□□□□ -1.52
SS18-223ENST00000583595 SNX27Q96L92 541 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 COG8Q96MW5 612 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 MAGEB5Q9BZ81 275 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 PRKRIP1Q9H875 184 aaPredicted RBP5.57□□□□□ -1.52
SS18-223ENST00000583595 BRD9Q9H8M2 597 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 L2HGDHQ9H9P8 463 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 PREBQ9HCU5 417 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 ZNF212Q9UDV6 495 aa5.57□□□□□ -1.52
SS18-223ENST00000583595 HERC5Q9UII4 1024 aaKnown RBP5.57□□□□□ -1.52
SS18-223ENST00000583595 C9orf118A6NHY6 69 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 FCHO1O14526 889 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 TMCC2O75069 709 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 CYP7B1O75881 506 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 A1BGP04217 495 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 ITGB3P05106 788 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 TXNP10599 105 aaKnown RBP5.56□□□□□ -1.52
SS18-223ENST00000583595 RXRAP19793 462 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 GUCY1A2P33402 732 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 PTPN7P35236 360 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 SEC24CP53992 1094 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 KRTAP10-2P60368 255 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 TLE2Q04725 743 aa5.56□□□□□ -1.52
SS18-223ENST00000583595 TMTC4Q5T4D3 741 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms