RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ALG8Q9BVK2 526 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 ACTRT3Q9BYD9 372 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.22□□□□□ -1.57
COPS3-217ENST00000583160 EHD3Q9NZN3 535 aa5.22□□□□□ -1.57
COPS3-217ENST00000583160 NOP58Q9Y2X3 529 aaKnown RBP5.22□□□□□ -1.57
COPS3-217ENST00000583160 H3BUI4 141 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 URI1O94763 535 aaPredicted RBP5.21□□□□□ -1.58
COPS3-217ENST00000583160 TTLL1O95922 423 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 VCAM1P19320 739 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 ITPKBP27987 946 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 CD6P30203 668 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 GCLCP48506 637 aaPredicted RBP5.21□□□□□ -1.58
COPS3-217ENST00000583160 PROK1P58294 105 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 BOP1Q14137 746 aaKnown RBP5.21□□□□□ -1.58
COPS3-217ENST00000583160 PPP1R32Q7Z5V6 425 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 AMIGO2Q86SJ2 522 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 RASAL3Q86YV0 1011 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 FAM46DQ8NEK8 389 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 RFKQ969G6 155 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 FAM136AQ96C01 138 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 TCF7L1Q9HCS4 588 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 AASDHPPTQ9NRN7 309 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 IP6K2Q9UHH9 426 aa5.21□□□□□ -1.58
COPS3-217ENST00000583160 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 GCOM1H8Y6P7 765 aaPredicted RBP5.2□□□□□ -1.58
COPS3-217ENST00000583160 HDCP19113 662 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 NKX6-1P78426 367 aaPredicted RBP5.2□□□□□ -1.58
COPS3-217ENST00000583160 EXOSC9Q06265 439 aaKnown RBP5.2□□□□□ -1.58
COPS3-217ENST00000583160 KRTAP1-1Q07627 177 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 PLS1Q14651 629 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 TBCCQ15814 346 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 FAM160B1Q5W0V3 765 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 FAM109AQ8N4B1 249 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 CAMKK1Q8N5S9 505 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 FKBP10Q96AY3 582 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 HOOK2Q96ED9 719 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 NUP88Q99567 741 aaPredicted RBP5.2□□□□□ -1.58
COPS3-217ENST00000583160 DKK3Q9UBP4 350 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 ADAM21Q9UKJ8 722 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 ANKRD6Q9Y2G4 727 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 WNT6Q9Y6F9 365 aa5.2□□□□□ -1.58
COPS3-217ENST00000583160 ANKRD62A6NC57 917 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 PF4V1P10720 104 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 CDK4P11802 303 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 ZFXP17010 805 aaPredicted RBP5.19□□□□□ -1.58
COPS3-217ENST00000583160 FOXF2Q12947 444 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 BMPR2Q13873 1038 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 PLAC9Q5JTB6 97 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 VPS53Q5VIR6 699 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 TMEM108Q6UXF1 575 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 SRRM1Q8IYB3 904 aaKnown RBP5.19□□□□□ -1.58
COPS3-217ENST00000583160 PCSK9Q8NBP7 692 aaKnown RBP5.19□□□□□ -1.58
COPS3-217ENST00000583160 BRIX1Q8TDN6 353 aaKnown RBP5.19□□□□□ -1.58
COPS3-217ENST00000583160 HPS3Q969F9 1004 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 SLC35A4Q96G79 324 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 NELL2Q99435 816 aa5.19□□□□□ -1.58
COPS3-217ENST00000583160 PPM1DO15297 605 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 ALDH2P05091 517 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 PIM1P11309 404 aaPredicted RBP5.18□□□□□ -1.58
COPS3-217ENST00000583160 CCT8P50990 548 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 ZNF134P52741 427 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 PTF1AQ7RTS3 328 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 GRAMD1CQ8IYS0 662 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 HASPINQ8TF76 798 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 CDK5RAP3Q96JB5 506 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 SLC46A1Q96NT5 459 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 MAP3K14Q99558 947 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 TTYH3Q9C0H2 523 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 SERHLQ9NQF3 203 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 ARHGEF3Q9NR81 526 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 SERTAD4Q9NUC0 356 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 PCDHA6Q9UN73 950 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 AOX1Q06278 1338 aa5.18□□□□□ -1.58
COPS3-217ENST00000583160 MANSC4A6NHS7 340 aaPredicted RBP5.17□□□□□ -1.58
COPS3-217ENST00000583160 ALDH1L1O75891 902 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 DNAJB5O75953 348 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 PDHA1P08559 390 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 CT47B1P0C2W7 299 aaPredicted RBP5.17□□□□□ -1.58
COPS3-217ENST00000583160 EBLN1P0CF75 366 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 SOX8P57073 446 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 SRSF4Q08170 494 aaKnown RBP5.17□□□□□ -1.58
COPS3-217ENST00000583160 EIF2B5Q13144 721 aaKnown RBP5.17□□□□□ -1.58
COPS3-217ENST00000583160 AMOTQ4VCS5 1084 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 KHDC1LQ5JSQ8 128 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 ATAT1Q5SQI0 421 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 EMC10Q5UCC4 262 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 FCRLBQ6BAA4 426 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 ZNF551Q7Z340 670 aaPredicted RBP5.17□□□□□ -1.58
COPS3-217ENST00000583160 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.17□□□□□ -1.58
COPS3-217ENST00000583160 KLHDC4Q8TBB5 520 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 ATRIPQ8WXE1 791 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 C1GALT1C1Q96EU7 318 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 CGRRF1Q99675 332 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 ARMT1Q9H993 441 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 SARS2Q9NP81 518 aaKnown RBP5.17□□□□□ -1.58
COPS3-217ENST00000583160 HESX1Q9UBX0 185 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 PADI4Q9UM07 663 aa5.17□□□□□ -1.58
COPS3-217ENST00000583160 WIPF3A6NGB9 483 aa5.16□□□□□ -1.58
COPS3-217ENST00000583160 CGB1A6NKQ9 187 aa5.16□□□□□ -1.58
COPS3-217ENST00000583160 DCLK1O15075 740 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms