RNA–Protein interactions for RNA: ENST00000582490.5

NDEL1-213, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-213ENST00000582490 FOXD2O60548 495 aaPredicted RBP6.62□□□□□ -1.35
NDEL1-213ENST00000582490 HNRNPA1P09651 372 aaKnown RBP eCLIP6.62□□□□□ -1.35
NDEL1-213ENST00000582490 SKILP12757 684 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 FOSL1P15407 271 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 ATP2B1P20020 1258 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 KIF5BP33176 963 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 RDXP35241 583 aaKnown RBP6.62□□□□□ -1.35
NDEL1-213ENST00000582490 SLC26A2P50443 739 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 CDR1P51861 262 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 PRKCEQ02156 737 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 CYP4F3Q08477 520 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 PPP2R5DQ14738 602 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 PSMD5Q16401 504 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 QPCTQ16769 361 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 MTERF2Q49AM1 385 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 MAP9Q49MG5 647 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 FAM171A1Q5VUB5 890 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 FSTL4Q6MZW2 842 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 PCGF5Q86SE9 256 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 PLA2G4DQ86XP0 818 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 RHPN2Q8IUC4 686 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 MEIOBQ8N635 442 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 ANKRD20A12PQ8NF67 263 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 MYRIPQ8NFW9 859 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 PIP4K2CQ8TBX8 421 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 NLRP4Q96MN2 994 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 UBAC1Q9BSL1 405 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 GCOM2Q9BZD3 368 aaPredicted RBP6.62□□□□□ -1.35
NDEL1-213ENST00000582490 NXF3Q9H4D5 531 aaKnown RBP6.62□□□□□ -1.35
NDEL1-213ENST00000582490 RNF41Q9H4P4 317 aaPredicted RBP6.62□□□□□ -1.35
NDEL1-213ENST00000582490 CCDC86Q9H6F5 360 aaKnown RBP6.62□□□□□ -1.35
NDEL1-213ENST00000582490 ZFP14Q9HCL3 533 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 AGPAT5Q9NUQ2 364 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 ADAM28Q9UKQ2 775 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 IPPQ9Y573 584 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 DOCK9Q9BZ29 2069 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 ARID2Q68CP9 1835 aa6.62□□□□□ -1.35
NDEL1-213ENST00000582490 ATXN2Q99700 1313 aaKnown RBP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 BSNQ9UPA5 3926 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 IGKV6-21A0A0C4DH24 114 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 MYBPHLA2RUH7 354 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 J3QKU1 62 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 ZNF263O14978 683 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 MAGEB2O15479 319 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 REC8O95072 547 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 EGFP01133 1207 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 PCP11498 1178 aaKnown RBP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 CD59P13987 128 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 HNRNPLP14866 589 aaKnown RBP eCLIP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 PSMC3P17980 439 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 MX1P20591 662 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 USP8P40818 1118 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 KPNA1P52294 538 aaPredicted RBP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 NUCB2P80303 420 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 CBX1P83916 185 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 SEMA3BQ13214 749 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 RBBP5Q15291 538 aaKnown RBP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 SYCP1Q15431 976 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 TEAD2Q15562 447 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 LIN9Q5TKA1 542 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 RNF20Q5VTR2 975 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 PLA2G4FQ68DD2 849 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 MIS18BP1Q6P0N0 1132 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 VASH1Q7L8A9 365 aaPredicted RBP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 MFSD6LQ8IWD5 586 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 RSPH1Q8WYR4 309 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 UBXN4Q92575 508 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 PIGKQ92643 395 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 CCDC47Q96A33 483 aaKnown RBP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 CDK5RAP3Q96JB5 506 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 ANO3Q9BYT9 981 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 TPSD1Q9BZJ3 242 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 GDE1Q9NZC3 331 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 CEP72Q9P209 647 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 CPSF2Q9P2I0 782 aaKnown RBP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 SUCLA2Q9P2R7 463 aaPredicted RBP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 KCNH3Q9ULD8 1083 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 USP20Q9Y2K6 914 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 R3HCC1Q9Y3T6 440 aaKnown RBP6.61□□□□□ -1.35
NDEL1-213ENST00000582490 BOD1L1Q8NFC6 3051 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 ITPR3Q14573 2671 aa6.61□□□□□ -1.35
NDEL1-213ENST00000582490 NUP210Q8TEM1 1887 aaPredicted RBP6.6□□□□□ -1.35
NDEL1-213ENST00000582490 ICE1Q9Y2F5 2266 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 FAM149AA5PLN7 773 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 SPDYE3A6NKU9 549 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 IFIT3O14879 490 aaKnown RBP6.6□□□□□ -1.35
NDEL1-213ENST00000582490 KHNYNO15037 678 aaKnown RBP6.6□□□□□ -1.35
NDEL1-213ENST00000582490 XYLBO75191 536 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 TADA2AO75478 443 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 SRGAP2CP0DJJ0 459 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 ITGA4P13612 1032 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 HOXA9P31269 272 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 MAN1A1P33908 653 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 PTGER3P43115 390 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 PDE1AP54750 535 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 NPEPPSP55786 919 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 RAB33AQ14088 237 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 NUMA1Q14980 2115 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 PPP2R5AQ15172 486 aa6.6□□□□□ -1.35
NDEL1-213ENST00000582490 CCDC178Q5BJE1 867 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms