RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	USP45	Q70EL2	814 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	ARHGEF19	Q8IW93	802 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	PRR18	Q8N4B5	295 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	CPEB3	Q8NE35	698 aa	Known RBP	3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	IL17RD	Q8NFM7	739 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	NUP133	Q8WUM0	1156 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	JPH3	Q8WXH2	748 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	DMRTA2	Q96SC8	542 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	MLST8	Q9BVC4	326 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	STK26	Q9P289	416 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	ING1	Q9UK53	422 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	ANKRD6	Q9Y2G4	727 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	STRCP1	A6NGW2	1772 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	POLR3A	O14802	1390 aa	Predicted RBP	3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	ATP7B	P35670	1465 aa		3.98	□□□□□ -1.77
MSI2-215	ENST00000582453	CFAP65	Q6ZU64	1925 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	AHDC1	Q5TGY3	1603 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	CDHR4	A6H8M9	788 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	TMEM191C	A6NGB0	347 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	LPXN	O60711	386 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	PRSS23	O95084	383 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	CD1A	P06126	327 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	ELANE	P08246	267 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	PF4V1	P10720	104 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	FGFR4	P22455	802 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	SLC6A4	P31645	630 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	ZNF280A	P59817	542 aa	Predicted RBP	3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	TGFB2	P61812	414 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	TMF1	P82094	1093 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	GUCY1B3	Q02153	619 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	TAP1	Q03518	808 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	OCA2	Q04671	838 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	DPT	Q07507	201 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	HLTF	Q14527	1009 aa	Known RBP eCLIP	3.97	□□□□□ -1.77	9e-8	■□□□□ 11.3
MSI2-215	ENST00000582453	SPDYE7P	Q495Y7	208 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	MAP9	Q49MG5	647 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	CXorf57	Q6NSI4	855 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	BRINP3	Q76B58	766 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	ZNF627	Q7L945	461 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	FAM43A	Q8N2R8	423 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	TMEM132C	Q8N3T6	1108 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	TBC1D15	Q8TC07	691 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	MED15	Q96RN5	788 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	PNKP	Q96T60	521 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	ADAM2	Q99965	735 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	PACSIN1	Q9BY11	444 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	ARNT2	Q9HBZ2	717 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	SIDT1	Q9NXL6	827 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	JKAMP	Q9P055	326 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	RNF181	Q9P0P0	153 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	IP6K2	Q9UHH9	426 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	KCNE5	Q9UJ90	142 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	POLH	Q9Y253	713 aa		3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	ARHGEF28	Q8N1W1	1705 aa	Known RBP	3.97	□□□□□ -1.77
MSI2-215	ENST00000582453	NPHP3	Q7Z494	1330 aa		3.96	□□□□□ -1.77
MSI2-215	ENST00000582453	NALCN	Q8IZF0	1738 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	SLC43A1	O75387	559 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	CDKL5	O76039	1030 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	GPANK1	O95872	356 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	FOS	P01100	380 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	SBK3	P0C264	359 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	CT47B1	P0C2W7	299 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	FTH1P19	P0C7X4	201 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	MAL	P21145	153 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	CYP2C19	P33261	490 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	HMGA2	P52926	109 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	INHBC	P55103	352 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	NOMO3	P69849	1222 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	REST	Q13127	1097 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	MLC1	Q15049	377 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	KHDC1	Q4VXA5	237 aa	Known RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	NOMO2	Q5JPE7	1267 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	B3GNTL1	Q67FW5	361 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	FOXR2	Q6PJQ5	311 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453		Q6ZPA2	131 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	ZNF365	Q70YC5	407 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	EPM2AIP1	Q7L775	607 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	MRGPRG	Q86SM5	289 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	LDLRAD3	Q86YD5	345 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	AOPEP	Q8N6M6	819 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	C3orf20	Q8ND61	904 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	FUBP1	Q96AE4	644 aa	Known RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	RGMA	Q96B86	450 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	BOD1	Q96IK1	185 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	CCDC136	Q96JN2	1154 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	VRK1	Q99986	396 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	ZSWIM1	Q9BR11	485 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	MRI	Q9BWK5	157 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	CDK19	Q9BWU1	502 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	SERHL2	Q9H4I8	314 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	TMEM74B	Q9NUR3	256 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	GNL3L	Q9NVN8	582 aa	Known RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	PNMA8B	Q9ULN7	279 aa	Predicted RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	MAP3K2	Q9Y2U5	619 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	RIPOR2	Q9Y4F9	1068 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	NOX1	Q9Y5S8	564 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	SBNO1	A3KN83	1393 aa		3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	POLR2A	P24928	1970 aa	Known RBP	3.96	□□□□□ -1.78
MSI2-215	ENST00000582453	WDR33	Q9C0J8	1336 aa	Known RBP	3.95	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms