RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PRSS55Q6UWB4 352 aaPredicted RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 RSPO2Q6UXX9 243 aaPredicted RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 IRF2BP2Q7Z5L9 587 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 ACOT1Q86TX2 421 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 UNC93AQ86WB7 457 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 VPS52Q8N1B4 723 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 CRYBG2Q8N1P7 616 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 TTC39CQ8N584 583 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 SLC4A11Q8NBS3 891 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 RBBP8NLQ8NC74 664 aaPredicted RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 ZNF397Q8NF99 534 aaPredicted RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 OR8K1Q8NGG5 319 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 LNX1Q8TBB1 728 aaPredicted RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 RIN2Q8WYP3 895 aaPredicted RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 PIK3R5Q8WYR1 880 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 ANP32BQ92688 251 aaKnown RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 TIFAQ96CG3 184 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 DNAJC7Q99615 494 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 LPIN3Q9BQK8 851 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 NT5C1AQ9BXI3 368 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 DPEP3Q9H4B8 488 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 CERS4Q9HA82 394 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 DDX43Q9NXZ2 648 aaKnown RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 AIPL1Q9NZN9 384 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 LZTS1Q9Y250 596 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 COL4A4P53420 1690 aaPredicted RBP10.17□□□□□ -0.78
RFFL-210ENST00000582308 PLXNA3P51805 1871 aa10.17□□□□□ -0.78
RFFL-210ENST00000582308 EPOPA6NHQ4 379 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 A8MXQ7 604 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 C2CD2LO14523 706 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 GRM6O15303 877 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 ADAM12O43184 909 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 CTSAP10619 480 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 PTPN1P18031 435 aaKnown RBP10.16□□□□□ -0.78
RFFL-210ENST00000582308 PCSK1P29120 753 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 HNRNPH3P31942 346 aaKnown RBP10.16□□□□□ -0.78
RFFL-210ENST00000582308 GLUD2P49448 558 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 ERVFC1P60507 584 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 CAMK1Q14012 370 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 CCDC142Q17RM4 750 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 CTXN3Q4LDR2 81 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 PRPF38BQ5VTL8 546 aaKnown RBP10.16□□□□□ -0.78
RFFL-210ENST00000582308 SFMBT2Q5VUG0 894 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 WDR59Q6PJI9 974 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 SLC47A2Q86VL8 602 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 CNGA4Q8IV77 575 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 THEM5Q8N1Q8 247 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 C12orf29Q8N999 325 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 FBXO22Q8NEZ5 403 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 OR10T2Q8NGX3 314 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 AUTS2Q8WXX7 1259 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 ARNTL2Q8WYA1 636 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 TFAP2BQ92481 460 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 SYN2Q92777 582 aaPredicted RBP10.16□□□□□ -0.78
RFFL-210ENST00000582308 TMEM176AQ96HP8 235 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 TMEM209Q96SK2 561 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 PKMYT1Q99640 499 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 SYT15Q9BQS2 421 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 ZSWIM1Q9BR11 485 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 ACBD6Q9BR61 282 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 C11orf84Q9BUA3 381 aaPredicted RBP10.16□□□□□ -0.78
RFFL-210ENST00000582308 ZBP1Q9H171 429 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 NUCKS1Q9H1E3 243 aaKnown RBP10.16□□□□□ -0.78
RFFL-210ENST00000582308 SLC28A3Q9HAS3 691 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 ABHD10Q9NUJ1 306 aa10.16□□□□□ -0.78
RFFL-210ENST00000582308 GREB1Q4ZG55 1949 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 MYBPHLA2RUH7 354 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 H3BNC9 293 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 H7C4K7 107 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 CXCL14O95715 111 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 PAEPP09466 180 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 SKILP12757 684 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 FERP16591 822 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 CDR1P51861 262 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 PSMC1P62191 440 aaKnown RBP10.15□□□□□ -0.78
RFFL-210ENST00000582308 UBE3AQ05086 875 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 GPM6BQ13491 265 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 PSMD5Q16401 504 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 ASIC2Q16515 512 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 HGSNATQ68CP4 663 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 ZNF280DQ6N043 979 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 KIAA1841Q6NSI8 718 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 FAM171BQ6P995 826 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 ANKS3Q6ZW76 656 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 CCDC186Q7Z3E2 898 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 NOP9Q86U38 636 aaKnown RBP10.15□□□□□ -0.78
RFFL-210ENST00000582308 LRRTM3Q86VH5 581 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 GPR65Q8IYL9 337 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 B3GALNT2Q8NCR0 500 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 EPS8L1Q8TE68 723 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 POF1BQ8WVV4 589 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 DDX1Q92499 740 aaKnown RBP10.15□□□□□ -0.78
RFFL-210ENST00000582308 HEXIM2Q96MH2 286 aaKnown RBP10.15□□□□□ -0.78
RFFL-210ENST00000582308 PANX2Q96RD6 677 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 PPP1R9BQ96SB3 815 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 CLSTN3Q9BQT9 956 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 ZCWPW1Q9H0M4 648 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 CRTAC1Q9NQ79 661 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 TMLHEQ9NVH6 421 aa10.15□□□□□ -0.78
RFFL-210ENST00000582308 MTRRQ9UBK8 725 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms