RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 NAB2Q15742 525 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 CLLU1OSQ5K130 101 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 ALKBH5Q6P6C2 394 aaKnown RBP13.43□□□□□ -0.26
SRSF1-204ENST00000581979 EP400NLQ6ZTU2 488 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 ADGRD2Q7Z7M1 963 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 GLYCTKQ8IVS8 523 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 ABI1Q8IZP0 508 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 LRRC43Q8N309 656 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 TAF4BQ92750 862 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 C1QTNF1Q9BXJ1 281 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 NIF3L1Q9GZT8 377 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 DPP3Q9NY33 737 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 MYO1AQ9UBC5 1043 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 NAGPAQ9UK23 515 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 ITGA11Q9UKX5 1188 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 LZTS1Q9Y250 596 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 IPPQ9Y573 584 aa13.43□□□□□ -0.26
SRSF1-204ENST00000581979 PJA2O43164 708 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 TBX10O75333 385 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 PLCB3Q01970 1234 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 TAF3Q5VWG9 929 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 PDE12Q6L8Q7 609 aaKnown RBP13.42□□□□□ -0.26
SRSF1-204ENST00000581979 NOP9Q86U38 636 aaKnown RBP13.42□□□□□ -0.26
SRSF1-204ENST00000581979 SLC47A2Q86VL8 602 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 EFHBQ8N7U6 833 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 SLC30A5Q8TAD4 765 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 EPS8L1Q8TE68 723 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 SLC20A1Q8WUM9 679 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 RSPH1Q8WYR4 309 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 IGFLR1Q9H665 355 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 TLR9Q9NR96 1032 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 PRKAG3Q9UGI9 489 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 SIX4Q9UIU6 781 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 AGAP1Q9UPQ3 857 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 MACROD2A1Z1Q3 448 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 FSCN2O14926 492 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 LINC01565O15544 149 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 CSPG5O95196 566 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 CYP11B1P15538 503 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 POLR2BP30876 1174 aaKnown RBP13.42□□□□□ -0.26
SRSF1-204ENST00000581979 ATICP31939 592 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 GUCY2FP51841 1108 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 RBP5P82980 135 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 ZNF667Q5HYK9 610 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 KCNT2Q6UVM3 1135 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 SCARA5Q6ZMJ2 495 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 HACE1Q8IYU2 909 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 GJD3Q8N144 294 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 SMG8Q8ND04 991 aaKnown RBP13.42□□□□□ -0.26
SRSF1-204ENST00000581979 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 KHSRPQ92945 711 aaKnown RBP eCLIP13.42□□□□□ -0.261e-17■■■□□ 15.3
SRSF1-204ENST00000581979 SECISBP2LQ93073 1101 aaKnown RBP13.42□□□□□ -0.26
SRSF1-204ENST00000581979 MSLNLQ96KJ4 702 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 WDR24Q96S15 920 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 SYT11Q9BT88 431 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 XYLT2Q9H1B5 865 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 EPHX3Q9H6B9 360 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 KLK14Q9P0G3 267 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 CNTN3Q9P232 1028 aa13.42□□□□□ -0.26
SRSF1-204ENST00000581979 NXF1Q9UBU9 619 aaKnown RBP13.42□□□□□ -0.26
SRSF1-204ENST00000581979 TMCO5BA8MYB1 307 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 ZNF623O75123 536 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 SKIP12755 728 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 ACO1P21399 889 aaKnown RBP13.41□□□□□ -0.26
SRSF1-204ENST00000581979 PPM1AP35813 382 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 BPIFB4P59827 614 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 ERVFC1P60507 584 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 YWHAEP62258 255 aaKnown RBP13.41□□□□□ -0.26
SRSF1-204ENST00000581979 SMAD2Q15796 467 aaKnown RBP13.41□□□□□ -0.26
SRSF1-204ENST00000581979 GLRA4Q5JXX5 417 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 TMEM270Q6UE05 265 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 ALKAL1Q6UXT8 129 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 SLC35F6Q8N357 371 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 TMEM130Q8N3G9 435 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 RBBP8NLQ8NC74 664 aaPredicted RBP13.41□□□□□ -0.26
SRSF1-204ENST00000581979 OLIG1Q8TAK6 271 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 ZMAT2Q96NC0 199 aaKnown RBP13.41□□□□□ -0.26
SRSF1-204ENST00000581979 ZNF558Q96NG5 402 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 PACSIN1Q9BY11 444 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 MRPL9Q9BYD2 267 aaKnown RBP13.41□□□□□ -0.26
SRSF1-204ENST00000581979 CXCL16Q9H2A7 254 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 ACP6Q9NPH0 428 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 FAM105AQ9NUU6 356 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 CLEC1BQ9P126 229 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 NOCTQ9UK39 431 aaKnown RBP13.41□□□□□ -0.26
SRSF1-204ENST00000581979 UBQLN1Q9UMX0 589 aaKnown RBP13.41□□□□□ -0.26
SRSF1-204ENST00000581979 NENFQ9UMX5 172 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 POLIQ9UNA4 740 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 PCDHB2Q9Y5E7 798 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 PCDHGC5Q9Y5F6 944 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 DUSP10Q9Y6W6 482 aa13.41□□□□□ -0.26
SRSF1-204ENST00000581979 C19orf67A6NJJ6 358 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 PI4K2BG5E9Z4 385 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 MBTPS2O43462 519 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 XPOTO43592 962 aaKnown RBP13.4□□□□□ -0.26
SRSF1-204ENST00000581979 MMEP08473 750 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 H2AFZP0C0S5 128 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 ITGA4P13612 1032 aa13.4□□□□□ -0.26
SRSF1-204ENST00000581979 P4HA1P13674 534 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms