RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 N4BP2L1Q5TBK1 243 aaPredicted RBP11.46□□□□□ -0.57
RFFL-209ENST00000581265 CRELD2Q6UXH1 353 aaPredicted RBP11.46□□□□□ -0.57
RFFL-209ENST00000581265 LRRTM3Q86VH5 581 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 METTL23Q86XA0 190 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 NT5DC4Q86YG4 428 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 GPIHBP1Q8IV16 184 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 THEM5Q8N1Q8 247 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 SYNPOQ8N3V7 929 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
RFFL-209ENST00000581265 C2orf15Q8WU43 125 aaKnown RBP11.46□□□□□ -0.57
RFFL-209ENST00000581265 STRA6Q9BX79 667 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 IL21Q9HBE4 155 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 SEMA4GQ9NTN9 838 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 DPP3Q9NY33 737 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 ZMYM5Q9UJ78 669 aa11.46□□□□□ -0.57
RFFL-209ENST00000581265 AGO2Q9UKV8 859 aaKnown RBP11.46□□□□□ -0.57
RFFL-209ENST00000581265 TICRRQ7Z2Z1 1910 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 TISP43B9A030 160 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 FOXD2O60548 495 aaPredicted RBP11.45□□□□□ -0.58
RFFL-209ENST00000581265 PPP1R37O75864 691 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 ATF6P18850 670 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 PMLP29590 882 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 CDC25CP30307 473 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 ADSSP30520 456 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 HOXA6P31267 233 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 CTHP32929 405 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 CNR2P34972 360 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 SOX9P48436 509 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 TAF6P49848 677 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 PLCB2Q00722 1185 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 CCINQ13939 588 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 VEPH1Q14D04 833 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 SLC39A12Q504Y0 691 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 WDR44Q5JSH3 913 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 WSCD1Q658N2 575 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 TXNDC11Q6PKC3 985 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 PRR23CQ6ZRP0 262 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 RASSF8Q8NHQ8 419 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 FAM200AQ8TCP9 573 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 SPPL2BQ8TCT7 592 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 BPIFB1Q8TDL5 484 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 HVCN1Q96D96 273 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 EPSTI1Q96J88 318 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 ZFYVE19Q96K21 471 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 SEPT5Q99719 369 aaPredicted RBP11.45□□□□□ -0.58
RFFL-209ENST00000581265 LPIN3Q9BQK8 851 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 PYM1Q9BRP8 204 aaKnown RBP11.45□□□□□ -0.58
RFFL-209ENST00000581265 SLC46A2Q9BY10 475 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 RBM12Q9NTZ6 932 aaKnown RBP11.45□□□□□ -0.58
RFFL-209ENST00000581265 GTSE1Q9NYZ3 720 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 SCN1AP35498 2009 aa11.45□□□□□ -0.58
RFFL-209ENST00000581265 USP24Q9UPU5 2620 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 SOBPA7XYQ1 873 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 KPNA7A9QM74 516 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 K7ESF4 209 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 HRO43593 1189 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 IL18RAPO95256 599 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 PRAMEF12O95522 483 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 HAPLN1P10915 354 aaPredicted RBP11.44□□□□□ -0.58
RFFL-209ENST00000581265 PTPAQ15257 358 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 CSRP2Q16527 193 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 MGAT5BQ3V5L5 792 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 AASDHQ4L235 1098 aaPredicted RBP11.44□□□□□ -0.58
RFFL-209ENST00000581265 USP49Q70CQ1 688 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.44□□□□□ -0.58
RFFL-209ENST00000581265 EFCAB13Q8IY85 973 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 DCP1BQ8IZD4 617 aaKnown RBP11.44□□□□□ -0.58
RFFL-209ENST00000581265 CMTM8Q8IZV2 173 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 POMGNT1Q8WZA1 660 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 FAM83CQ9BQN1 747 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 THG1LQ9NWX6 298 aaKnown RBP11.44□□□□□ -0.58
RFFL-209ENST00000581265 SEL1LQ9UBV2 794 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 STK17AQ9UEE5 414 aa11.44□□□□□ -0.58
RFFL-209ENST00000581265 CHURC1-FNTBB4DL54 471 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 F11P03951 625 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 HMGA1P17096 107 aaKnown RBP11.43□□□□□ -0.58
RFFL-209ENST00000581265 PNPLA4P41247 253 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 FNTBP49356 437 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 SHC2P98077 582 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 CYP4F8P98187 520 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 TNK2Q07912 1038 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 SIM2Q14190 667 aaPredicted RBP11.43□□□□□ -0.58
RFFL-209ENST00000581265 TAF12Q16514 161 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 ITPRIPL2Q3MIP1 535 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 SV2CQ496J9 727 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 Q6ZS52 159 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 DYMQ7RTS9 669 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 TMEM150AQ86TG1 271 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 LONP2Q86WA8 852 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 SFR1Q86XK3 245 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 TTC8Q8TAM2 541 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 GIPC2Q8TF65 315 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 DNAJC19Q96DA6 116 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 GCNAQ96QF7 691 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 IKZF4Q9H2S9 585 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 UPF2Q9HAU5 1272 aaKnown RBP11.43□□□□□ -0.58
RFFL-209ENST00000581265 GKN1Q9NS71 199 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 CCDC39Q9UFE4 941 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 ZMIZ1Q9ULJ6 1067 aa11.43□□□□□ -0.58
RFFL-209ENST00000581265 EXOC7Q9UPT5 735 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms