RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 CPSF3Q9UKF6 684 aaKnown RBP9.26□□□□□ -0.93
CASC3-206ENST00000579238 ANGPTL2Q9UKU9 493 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 PCDHGA5Q9Y5G8 931 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 KMT2BQ9UMN6 2715 aaPredicted RBP9.26□□□□□ -0.93
CASC3-206ENST00000579238 MYH11P35749 1972 aa9.26□□□□□ -0.93
CASC3-206ENST00000579238 VWA3AA6NCI4 1184 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 K7ENM7 598 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 CYB561D2O14569 222 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 TRDMT1O14717 391 aaKnown RBP9.25□□□□□ -0.93
CASC3-206ENST00000579238 FAM13AO94988 1023 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 SEC24BO95487 1268 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 NFICP08651 508 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 CCDC192P0DO97 292 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 HAPLN1P10915 354 aaPredicted RBP9.25□□□□□ -0.93
CASC3-206ENST00000579238 KCNA4P22459 653 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 DDX6P26196 483 aaKnown RBP eCLIP9.25□□□□□ -0.93
CASC3-206ENST00000579238 PMLP29590 882 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 ABCD1P33897 745 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 ZNF131P52739 623 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 SHC2P98077 582 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 AMPD2Q01433 879 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 RUNX3Q13761 415 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 SF3A2Q15428 464 aaKnown RBP9.25□□□□□ -0.93
CASC3-206ENST00000579238 N4BP2L1Q5TBK1 243 aaPredicted RBP9.25□□□□□ -0.93
CASC3-206ENST00000579238 ARL6IP4Q66PJ3 421 aaKnown RBP9.25□□□□□ -0.93
CASC3-206ENST00000579238 FSTL4Q6MZW2 842 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 SLC39A4Q6P5W5 647 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 PKN3Q6P5Z2 889 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 KBTBD6Q86V97 674 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 MYCT1Q8N699 235 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 GIPC2Q8TF65 315 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 REEP2Q9BRK0 252 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 SMG9Q9H0W8 520 aaKnown RBP9.25□□□□□ -0.93
CASC3-206ENST00000579238 ASB7Q9H672 318 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 KIF9Q9HAQ2 790 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 PARVGQ9HBI0 331 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 HPS4Q9NQG7 708 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 SLC8A2Q9UPR5 921 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 C2CD2Q9Y426 696 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 KIF3AQ9Y496 699 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 SDK1Q7Z5N4 2213 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 MAP1BP46821 2468 aaKnown RBP9.25□□□□□ -0.93
CASC3-206ENST00000579238 GREB1Q4ZG55 1949 aa9.25□□□□□ -0.93
CASC3-206ENST00000579238 CNOT1A5YKK6 2376 aaKnown RBP9.24□□□□□ -0.93
CASC3-206ENST00000579238 SOBPA7XYQ1 873 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 TRAK2O60296 914 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 F11P03951 625 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 HMGA1P17096 107 aaKnown RBP9.24□□□□□ -0.93
CASC3-206ENST00000579238 AVPR1AP37288 418 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 PXNP49023 591 aaPredicted RBP9.24□□□□□ -0.93
CASC3-206ENST00000579238 TAF6P49848 677 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 NLRP12P59046 1061 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 GTF2BQ00403 316 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 POU5F1Q01860 360 aaKnown RBP9.24□□□□□ -0.93
CASC3-206ENST00000579238 BFSP1Q12934 665 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 CCDC6Q16204 474 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 FBXO43Q4G163 708 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 PLA2G2CQ5R387 149 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 STPG1Q5TH74 334 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 WSCD1Q658N2 575 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 MCTP1Q6DN14 999 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 TMEM150AQ86TG1 271 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 LRRTM3Q86VH5 581 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 GPBP1Q86WP2 473 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 DCP1BQ8IZD4 617 aaKnown RBP9.24□□□□□ -0.93
CASC3-206ENST00000579238 CAMKK1Q8N5S9 505 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 MAB21L3Q8N8X9 362 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 USP13Q92995 863 aaPredicted RBP9.24□□□□□ -0.93
CASC3-206ENST00000579238 EXOC4Q96A65 974 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 CHFRQ96EP1 664 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 ZC3H10Q96K80 434 aaKnown RBP9.24□□□□□ -0.93
CASC3-206ENST00000579238 AK8Q96MA6 479 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 PYM1Q9BRP8 204 aaKnown RBP9.24□□□□□ -0.93
CASC3-206ENST00000579238 CCSER1Q9C0I3 900 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 EBF3Q9H4W6 596 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 RXFP3Q9NSD7 469 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 TDP1Q9NUW8 608 aa9.24□□□□□ -0.93
CASC3-206ENST00000579238 ABI2Q9NYB9 513 aaPredicted RBP9.24□□□□□ -0.93
CASC3-206ENST00000579238 SPAG17Q6Q759 2223 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 OTOL1A6NHN0 477 aaPredicted RBP9.23□□□□□ -0.93
CASC3-206ENST00000579238 ANKRD63C9JTQ0 380 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 RNF40O75150 1001 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 EGFP01133 1207 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 NEFLP07196 543 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 CSH1P0DML2 217 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 CSH2P0DML3 217 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 ARSAP15289 507 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 DRD1P21728 446 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 MPLP40238 635 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 UBA7P41226 1012 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 ACOT2P49753 483 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 CDR1P51861 262 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 ZNF268Q14587 947 aaPredicted RBP9.23□□□□□ -0.93
CASC3-206ENST00000579238 PDGFRLQ15198 375 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 SV2CQ496J9 727 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 TRIM68Q6AZZ1 485 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 ADALQ6DHV7 355 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 SLFN12LQ6IEE8 588 aa9.23□□□□□ -0.93
CASC3-206ENST00000579238 CC2D1AQ6P1N0 951 aaPredicted RBP9.23□□□□□ -0.93
CASC3-206ENST00000579238 MON1AQ86VX9 555 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms