RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 TIMM50Q3ZCQ8 353 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 C11orf88Q6PI97 169 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 IFNEQ86WN2 208 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 DCP1BQ8IZD4 617 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 PCYOX1LQ8NBM8 494 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 DYNLL2Q96FJ2 89 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 VCPIP1Q96JH7 1222 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 MRPL1Q9BYD6 325 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 POLR3FQ9H1D9 316 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 IPPQ9Y573 584 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 MMP1P03956 469 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 IDO1P14902 403 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SERPINB1P30740 379 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PGM1P36871 562 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ALDH18A1P54886 795 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 RPL19P84098 196 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 FAM83BQ5T0W9 1011 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 IZUMO3Q5VZ72 239 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 TRIM72Q6ZMU5 477 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 METTL16Q86W50 562 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 MMGT1Q8N4V1 131 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ATPAF2Q8N5M1 289 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PAGE5Q96GU1 130 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SNF8Q96H20 258 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 WRNIP1Q96S55 665 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 APOL5Q9BWW9 433 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CCDC134Q9H6E4 229 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.33□□□□□ -1.56
NF1-219ENST00000579081 ZC3H13Q5T200 1668 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 H3BQF6 201 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ERN1O75460 977 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 USP17L8P0C7I0 530 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ENO3P13929 434 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 KCNK10P57789 538 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SGO1Q5FBB7 561 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 WDR93Q6P2C0 686 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CCDC60Q8IWA6 550 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 C17orf50Q8WW18 174 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 DLG3Q92796 817 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ITFG2Q969R8 447 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 EAF2Q96CJ1 260 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 COA1Q9GZY4 146 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SAMSN1Q9NSI8 373 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 KLHL11Q9NVR0 708 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PYCARDQ9ULZ3 195 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 LRCH1Q9Y2L9 728 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 RBM47A0AV96 593 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 FAM187AA6NFU0 413 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PDLIM1O00151 329 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 OPLAHO14841 1288 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CDC25AP30304 524 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 VAMP7P51809 220 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ARL6IP4Q66PJ3 421 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 TRIM65Q6PJ69 517 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 C16orf89Q6UX73 402 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 POMGNT2Q8NAT1 580 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 OR6J1Q8NGC5 347 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PNKPQ96T60 521 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SEPT5Q99719 369 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 CCT7Q99832 543 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 OXCT2Q9BYC2 517 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 ETNK1Q9HBU6 452 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 MLXIPLQ9NP71 852 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 KRT84Q9NSB2 600 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PNMA8BQ9ULN7 279 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 GH2P01242 217 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CDC27P30260 824 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CDK8P49336 464 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 EIF3EP60228 445 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 BYSLQ13895 437 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 WLSQ5T9L3 541 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CALML6Q8TD86 181 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 GPR63Q9BZJ6 419 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SLC24A3Q9HC58 644 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SLAIN2Q9P270 581 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 GABBR1Q9UBS5 961 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PIN4Q9Y237 131 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 ITSN1Q15811 1721 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CIAO1O76071 339 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 NR3C1P04150 777 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 PHKG2P15735 406 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CYP2C19P33261 490 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 GPC1P35052 558 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 IL13P35225 146 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 CSTF3Q12996 717 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 CUL4AQ13619 759 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 DHX34Q14147 1143 aaKnown RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 MOSPD2Q8NHP6 518 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ZNF512Q96ME7 567 aaPredicted RBP5.33□□□□□ -1.56
NF1-219ENST00000579081 PRRG3Q9BZD7 231 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 GPR108Q9NPR9 543 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 VTI1BQ9UEU0 232 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 SLC39A10Q9ULF5 831 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 ST14Q9Y5Y6 855 aa5.33□□□□□ -1.56
NF1-219ENST00000579081 NTRK1P04629 796 aa5.32□□□□□ -1.56
NF1-219ENST00000579081 ERVK-10P10266 1014 aa5.32□□□□□ -1.56
NF1-219ENST00000579081 ITGA1P56199 1179 aa5.32□□□□□ -1.56
NF1-219ENST00000579081 MAGOHP61326 146 aaKnown RBP5.32□□□□□ -1.56
NF1-219ENST00000579081 TMEM132BQ14DG7 1078 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms