RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 PCDHGA2Q9Y5H1 932 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 SRPRBQ9Y5M8 271 aaKnown RBP9.65□□□□□ -0.86
GGA3-207ENST00000578896 STYXL1Q9Y6J8 313 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 NUP210Q8TEM1 1887 aaPredicted RBP9.65□□□□□ -0.86
GGA3-207ENST00000578896 ACACBO00763 2458 aa9.65□□□□□ -0.86
GGA3-207ENST00000578896 KPNA7A9QM74 516 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 CHURC1-FNTBB4DL54 471 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 SPECC1L-ADORA2AF8WAN1 911 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 CHADO15335 359 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 PPP1R37O75864 691 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 GCNT3O95395 438 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 HAPLN1P10915 354 aaPredicted RBP9.64□□□□□ -0.87
GGA3-207ENST00000578896 SYT1P21579 422 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 ACAT1P24752 427 aaKnown RBP9.64□□□□□ -0.87
GGA3-207ENST00000578896 POLR2BP30876 1174 aaKnown RBP9.64□□□□□ -0.87
GGA3-207ENST00000578896 FNTBP49356 437 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 FCHO2Q0JRZ9 810 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 DDR2Q16832 855 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 SLFN12LQ6IEE8 588 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 PRR23BQ6ZRT6 265 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 SV2BQ7L1I2 683 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 DGLUCYQ7Z3D6 616 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 OSTM1Q86WC4 334 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 THEM5Q8N1Q8 247 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 PDILTQ8N807 584 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 GLIS3Q8NEA6 775 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 TTC16Q8NEE8 873 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 ACCSQ96QU6 501 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 USP28Q96RU2 1077 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 CBWD1Q9BRT8 395 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 PI4K2AQ9BTU6 479 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 STRA6Q9BX79 667 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 OXCT2Q9BYC2 517 aaPredicted RBP9.64□□□□□ -0.87
GGA3-207ENST00000578896 GPR88Q9GZN0 384 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 ST6GALNAC4Q9H4F1 302 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 PARD6AQ9NPB6 346 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 TRPV5Q9NQA5 729 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 POLR3BQ9NW08 1133 aaPredicted RBP9.64□□□□□ -0.87
GGA3-207ENST00000578896 CCDC39Q9UFE4 941 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 MAGED2Q9UNF1 606 aaPredicted RBP9.64□□□□□ -0.87
GGA3-207ENST00000578896 AGAP1Q9UPQ3 857 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 CCL26Q9Y258 94 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 C2CD2Q9Y426 696 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 ASB3Q9Y575 518 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 EPG5Q9HCE0 2579 aa9.64□□□□□ -0.87
GGA3-207ENST00000578896 MYOFQ9NZM1 2061 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 CHD8Q9HCK8 2581 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 HRO43593 1189 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 PRPF40AO75400 957 aaKnown RBP9.63□□□□□ -0.87
GGA3-207ENST00000578896 ITGB3P05106 788 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 CTHP32929 405 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 CXCL12P48061 93 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 TUFMP49411 452 aaKnown RBP9.63□□□□□ -0.87
GGA3-207ENST00000578896 FOXK2Q01167 660 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 BFSP1Q12934 665 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 VEPH1Q14D04 833 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 TAF12Q16514 161 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 ARHGAP15Q53QZ3 475 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 L1TD1Q5T7N2 865 aaKnown RBP9.63□□□□□ -0.87
GGA3-207ENST00000578896 FOXD4L5Q5VV16 416 aaPredicted RBP9.63□□□□□ -0.87
GGA3-207ENST00000578896 NAIF1Q69YI7 327 aaPredicted RBP9.63□□□□□ -0.87
GGA3-207ENST00000578896 TXNDC8Q6A555 127 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 TRIM68Q6AZZ1 485 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 PKN3Q6P5Z2 889 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 ERMP1Q7Z2K6 904 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 TMEM150AQ86TG1 271 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 ITIH5Q86UX2 942 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 BRSK2Q8IWQ3 736 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 SYCP3Q8IZU3 236 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 PDCL2Q8N4E4 241 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 CSGALNACT2Q8N6G5 542 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 MAB21L3Q8N8X9 362 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 C1orf127Q8N9H9 656 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 RIN3Q8TB24 985 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 BPIFB1Q8TDL5 484 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 FOXD4L4Q8WXT5 416 aaPredicted RBP9.63□□□□□ -0.87
GGA3-207ENST00000578896 TSPAN18Q96SJ8 248 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 EPC1Q9H2F5 836 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 TASP1Q9H6P5 420 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 PDE11AQ9HCR9 933 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 GKN1Q9NS71 199 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 PANK4Q9NVE7 773 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 DSEQ9UL01 958 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 USP18Q9UMW8 372 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 L1RE1Q9UN81 338 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 MTMR6Q9Y217 621 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 OBSL1O75147 1896 aa9.63□□□□□ -0.87
GGA3-207ENST00000578896 ABCA7Q8IZY2 2146 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 ANAPC1Q9H1A4 1944 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 MYO18AQ92614 2054 aaKnown RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 MYBPHLA2RUH7 354 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 OTOL1A6NHN0 477 aaPredicted RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 IL18RAPO95256 599 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 F11P03951 625 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 KRT19P08727 400 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 HMGA1P17096 107 aaKnown RBP9.62□□□□□ -0.87
GGA3-207ENST00000578896 GAP43P17677 238 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 SCP2P22307 547 aa9.62□□□□□ -0.87
GGA3-207ENST00000578896 TGM1P22735 817 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms