RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 DEFB123Q8N688 67 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 SPC24Q8NBT2 197 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 RBBP8NLQ8NC74 664 aaPredicted RBP12.95□□□□□ -0.34
IFT20-207ENST00000578547 OR10T2Q8NGX3 314 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 PIK3R5Q8WYR1 880 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 TWNKQ96RR1 684 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 TMEM209Q96SK2 561 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 RTP3Q9BQQ7 232 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 NUP58Q9BVL2 599 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 NAA15Q9BXJ9 866 aaKnown RBP12.95□□□□□ -0.34
IFT20-207ENST00000578547 STK33Q9BYT3 514 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 ELOVL4Q9GZR5 314 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 DPEP3Q9H4B8 488 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 BARX2Q9UMQ3 279 aaPredicted RBP12.95□□□□□ -0.34
IFT20-207ENST00000578547 STXBP5LQ9Y2K9 1186 aa12.95□□□□□ -0.34
IFT20-207ENST00000578547 GABRDO14764 452 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 LILRB3O75022 631 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 CILPO75339 1184 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 GFPT2O94808 682 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 OAZ2O95190 189 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 CXCL14O95715 111 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 CALCAP01258 141 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 OR4Q2P0C623 313 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 CPB1P15086 417 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 PCSK1P29120 753 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 CDC25BP30305 580 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 ARID5AQ03989 594 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 GOLGA8FQ08AF8 430 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 GOLGA8DPQ0D2H9 430 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 TRIM14Q14142 442 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 SMC1AQ14683 1233 aaKnown RBP12.94□□□□□ -0.34
IFT20-207ENST00000578547 CCDC142Q17RM4 750 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 PDXDC1Q6P996 788 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 ACOT1Q86TX2 421 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 TTC39CQ8N584 583 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 UBR7Q8N806 425 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 LNX1Q8TBB1 728 aaPredicted RBP12.94□□□□□ -0.34
IFT20-207ENST00000578547 SPATA18Q8TC71 538 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 WHAMMQ8TF30 809 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 SHC3Q92529 594 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 ANP32BQ92688 251 aaKnown RBP12.94□□□□□ -0.34
IFT20-207ENST00000578547 JAKMIP2Q96AA8 810 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 MRPL38Q96DV4 380 aaKnown RBP12.94□□□□□ -0.34
IFT20-207ENST00000578547 CDX2Q99626 313 aaPredicted RBP12.94□□□□□ -0.34
IFT20-207ENST00000578547 LPIN3Q9BQK8 851 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 SYT15Q9BQS2 421 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 NT5C1AQ9BXI3 368 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 TTYH3Q9C0H2 523 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 GPR88Q9GZN0 384 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 LMAN2LQ9H0V9 348 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 MTRRQ9UBK8 725 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 FBXL5Q9UKA1 691 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 DAAM1Q9Y4D1 1078 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 NME7Q9Y5B8 376 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 CDY1Q9Y6F8 540 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 MYO7AQ13402 2215 aa12.94□□□□□ -0.34
IFT20-207ENST00000578547 OR6C75A6NL08 312 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 LRRC53A6NM62 1247 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 HIDE1A8MVS5 230 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 RNF225M0QZC1 329 aaPredicted RBP12.93□□□□□ -0.34
IFT20-207ENST00000578547 FOXN3O00409 490 aaPredicted RBP12.93□□□□□ -0.34
IFT20-207ENST00000578547 CYP26A1O43174 497 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 ADAM12O43184 909 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 ATP2C2O75185 946 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 FAM163BP0C2L3 166 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 CD19P15391 556 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 CASP14P31944 242 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 OR1D2P34982 312 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 SOX5P35711 763 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 STAT1P42224 750 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 RAD23BP54727 409 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 JAM2P57087 298 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 TSPY1Q01534 308 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 CREMQ03060 361 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 MRPL58Q14197 206 aaKnown RBP12.93□□□□□ -0.34
IFT20-207ENST00000578547 PTPROQ16827 1216 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 SLC39A12Q504Y0 691 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 FIGNQ5HY92 759 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 MDH1BQ5I0G3 518 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 RSPO2Q6UXX9 243 aaPredicted RBP12.93□□□□□ -0.34
IFT20-207ENST00000578547 UNC93AQ86WB7 457 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 MRPL43Q8N983 215 aaKnown RBP12.93□□□□□ -0.34
IFT20-207ENST00000578547 B3GALNT2Q8NCR0 500 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 ZNF397Q8NF99 534 aaPredicted RBP12.93□□□□□ -0.34
IFT20-207ENST00000578547 BAP1Q92560 729 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 IQCDQ96DY2 449 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 TMEM176AQ96HP8 235 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 TNIP3Q96KP6 325 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 HEXIM2Q96MH2 286 aaKnown RBP12.93□□□□□ -0.34
IFT20-207ENST00000578547 GUCD1Q96NT3 240 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 ACBD6Q9BR61 282 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 DNAI2Q9GZS0 605 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 NGRNQ9NPE2 291 aaKnown RBP12.93□□□□□ -0.34
IFT20-207ENST00000578547 FAM49BQ9NUQ9 324 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 MTMR10Q9NXD2 777 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 CDH9Q9ULB4 789 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 SSX2IPQ9Y2D8 614 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 LUC7L2Q9Y383 392 aaKnown RBP12.93□□□□□ -0.34
IFT20-207ENST00000578547 MTCH2Q9Y6C9 303 aa12.93□□□□□ -0.34
IFT20-207ENST00000578547 TRANK1O15050 2925 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms