RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 SCARA5Q6ZMJ2 495 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 RRAGAQ7L523 313 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 TMC6Q7Z403 805 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 DDX53Q86TM3 631 aaKnown RBP11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 UNC93AQ86WB7 457 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 DRC7Q8IY82 874 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 RNF168Q8IYW5 571 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 ADGRF2Q8IZF7 708 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 BCL7CQ8WUZ0 217 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 SPAG5Q96R06 1193 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 HERC2P3Q9BVR0 1158 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 NAA15Q9BXJ9 866 aaKnown RBP11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 IRX2Q9BZI1 471 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 TTYH3Q9C0H2 523 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 SNX25Q9H3E2 840 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 SMYD3Q9H7B4 428 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.96□□□□□ -0.492e-9■■■■■ 223.6
TRAPPC8-204ENST00000578252 IMPACTQ9P2X3 320 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 DNAJC12Q9UKB3 198 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 L1RE1Q9UN81 338 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 POLIQ9UNA4 740 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 SSX2IPQ9Y2D8 614 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 YBX2Q9Y2T7 364 aaKnown RBP11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 FHOD1Q9Y613 1164 aa11.96□□□□□ -0.49
TRAPPC8-204ENST00000578252 PLXNA4Q9HCM2 1894 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 TMEM265A0A087WTH1 108 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 F8W810 466 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 H7C4K7 107 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 LRRN2O75325 713 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 CCDC172P0C7W6 258 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 MYOGP15173 224 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 PCSK1P29120 753 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 CREMQ03060 361 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 YWHAHQ04917 246 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 RAPGEF1Q13905 1077 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 FAM171A1Q5VUB5 890 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 OVOS1Q6IE37 1185 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 ANKS3Q6ZW76 656 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 TMEM173Q86WV6 379 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 THEM5Q8N1Q8 247 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 PDCL2Q8N4E4 241 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 KLHL23Q8NBE8 558 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 SHC3Q92529 594 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 TIFAQ96CG3 184 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 KREMEN1Q96MU8 473 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 C17orf80Q9BSJ5 609 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 TTPALQ9BTX7 342 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 GPR62Q9BZJ7 368 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 NKX2-4Q9H2Z4 354 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 CISHQ9NSE2 258 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 BARX2Q9UMQ3 279 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 CAPN11Q9UMQ6 739 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 LUC7L2Q9Y383 392 aaKnown RBP11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 VWA8A3KMH1 1905 aa11.95□□□□□ -0.5
TRAPPC8-204ENST00000578252 F8VZ95 297 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 I3L4J1 428 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 GABRDO14764 452 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 EPHB6O15197 1021 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 CILPO75339 1184 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 OAZ2O95190 189 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 GYPCP04921 128 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 URODP06132 367 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 WEE2P0C1S8 567 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 ACO1P21399 889 aaKnown RBP11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 TKTP29401 623 aaKnown RBP11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 STAT1P42224 750 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 GLUD2P49448 558 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 ZBED6P86452 979 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 APBA1Q02410 837 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 DRAP1Q14919 205 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 ARHGAP44Q17R89 818 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 WSCD1Q658N2 575 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 ZNF280DQ6N043 979 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 KIAA1841Q6NSI8 718 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 GJB7Q6PEY0 223 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 CNGA4Q8IV77 575 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 UBR7Q8N806 425 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 OR6B3Q8NGW1 331 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 KBTBD7Q8WVZ9 684 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 PIK3R5Q8WYR1 880 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 ELMO3Q96BJ8 720 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 TNIP3Q96KP6 325 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 ARID3AQ99856 593 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 LMAN2LQ9H0V9 348 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 SDCBP2Q9H190 292 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 CHST7Q9NS84 486 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 CNTN6Q9UQ52 1028 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 PCDHB4Q9Y5E5 795 aa11.94□□□□□ -0.5
TRAPPC8-204ENST00000578252 OR6C75A6NL08 312 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 A8MXQ7 604 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 H3BNC9 293 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 PAEPP09466 180 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 CD58P19256 250 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 IGFBP6P24592 240 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 GNL1P36915 607 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 RAP1GAPP47736 663 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 NDST1P52848 882 aa11.93□□□□□ -0.5
TRAPPC8-204ENST00000578252 CDH8P55286 799 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms