RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 MYCT1Q8N699 235 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 RAD54LQ92698 747 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 ACDQ96AP0 544 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 FAM83CQ9BQN1 747 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 REEP2Q9BRK0 252 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 CRISPLD1Q9H336 500 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 POLD4Q9HCU8 107 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 PCDHB5Q9Y5E4 795 aa12.14□□□□□ -0.47
SMARCE1-214ENST00000578112 KIAA1549LQ6ZVL6 1849 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 SFI1A8K8P3 1242 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 NOL4O94818 638 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 GAP43P17677 238 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 TNFSF9P41273 254 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 TSPY1Q01534 308 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 TAF12Q16514 161 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 FAM160A2Q8N612 972 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 NAP1L5Q96NT1 182 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 CNTNAP3BQ96NU0 1288 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 CNTNAP3Q9BZ76 1288 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 STK17AQ9UEE5 414 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 VWA3AA6NCI4 1184 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 NRG2O14511 850 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 FAM163BP0C2L3 166 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 GJA1P17302 382 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 DPP6P42658 865 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 RUNX3Q13761 415 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 PPM1JQ5JR12 505 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 IL31Q6EBC2 164 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 MON1AQ86VX9 555 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 CPA6Q8N4T0 437 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 LRRC52Q8N7C0 313 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 CACTINQ8WUQ7 758 aaKnown RBP12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 FUBP3Q96I24 572 aaKnown RBP eCLIP12.13□□□□□ -0.476e-7■□□□□ 8.2
SMARCE1-214ENST00000578112 MYRFLQ96LU7 910 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 PGLYRP2Q96PD5 576 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 VPS45Q9NRW7 570 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 EHD2Q9NZN4 543 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 EBF1Q9UH73 591 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 SLC8A2Q9UPR5 921 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 OBSL1O75147 1896 aa12.13□□□□□ -0.47
SMARCE1-214ENST00000578112 SLC38A8A6NNN8 435 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 CYB561D2O14569 222 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 RHOBTB1O94844 696 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 F11P03951 625 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 NLRP12P59046 1061 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 MGAT5BQ3V5L5 792 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 SLC39A12Q504Y0 691 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 PLA2G2CQ5R387 149 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 ATAD1Q8NBU5 361 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 OR10T2Q8NGX3 314 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 MRPS31Q92665 395 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 FIZ1Q96SL8 496 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 ACBD6Q9BR61 282 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 DPP3Q9NY33 737 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 AGO2Q9UKV8 859 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 TIMM13Q9Y5L4 95 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 TCHHQ07283 1943 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 RPP40O75818 363 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 KRT18P05783 430 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 ATF6P18850 670 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 AVPR1AP37288 418 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 PON2Q15165 354 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 SEZ6Q53EL9 994 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 DPH6Q7L8W6 267 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 KRI1Q8N9T8 703 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 C12orf50Q8NA57 414 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 KIF2CQ99661 725 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 SEPT5Q99719 369 aaPredicted RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 SLC27A5Q9Y2P5 690 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 RIF1Q5UIP0 2472 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 TRIOO75962 3097 aa12.12□□□□□ -0.47
SMARCE1-214ENST00000578112 H3BQV1 296 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 NFICP08651 508 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 GARTP22102 1010 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 PMLP29590 882 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 MYL7Q01449 175 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 SURF1Q15526 300 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 ST3GAL2Q16842 350 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 HSF5Q4G112 596 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 SLC39A4Q6P5W5 647 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 TXNDC11Q6PKC3 985 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 LARP4BQ92615 738 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 SLC46A2Q9BY10 475 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 BLOC1S4Q9NUP1 217 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 PPP1R37O75864 691 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 USP17L7P0C7H9 530 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 MAGEA11P43364 429 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 PPP3CCP48454 512 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 BFSP1Q12934 665 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 USP4Q13107 963 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 NR1H3Q13133 447 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 AASDHQ4L235 1098 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 FSTL4Q6MZW2 842 aa12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 CC2D1AQ6P1N0 951 aaPredicted RBP12.11□□□□□ -0.47
SMARCE1-214ENST00000578112 SYT13Q7L8C5 426 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms