RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 NAT9Q9BTE0 207 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 HOXC10Q9NYD6 342 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 MCM8Q9UJA3 840 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 NID2Q14112 1375 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 PSMD3O43242 534 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 ECE2O60344 883 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 ESRRBO95718 433 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 RRM1P23921 792 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 ARHGDIAP52565 204 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 LRRC8EQ6NSJ5 796 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 PID1Q7Z2X4 250 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 SIKE1Q9BRV8 207 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 NOD1Q9Y239 953 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 ZNF711Q9Y462 761 aa10.84□□□□□ -0.67
PTPRM-205ENST00000577827 DNAJC6O75061 913 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 WFS1O76024 890 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 GRK2P25098 689 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 PMLP29590 882 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 SESN2P58004 480 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 LAMB3Q13751 1172 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 PRKG1Q13976 671 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 WDR72Q3MJ13 1102 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 SUPT20HL1Q3ZLR7 823 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 STRIP1Q5VSL9 837 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 SNRNP48Q6IEG0 339 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 GPAT2Q6NUI2 795 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 ZNF572Q7Z3I7 529 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 BEST2Q8NFU1 509 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 CCT7Q99832 543 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 LBHD1Q9BQE6 289 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 KRT82Q9NSB4 513 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 CORO1CQ9ULV4 474 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 IFT172Q9UG01 1749 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 AGPSO00116 658 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 RGL2O15211 777 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 WDR46O15213 610 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 LSM8O95777 96 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 ENO3P13929 434 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 PCYT1AP49585 367 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 CCNA1P78396 465 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 C1QBPQ07021 282 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 KIF22Q14807 665 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 CCDC92Q53HC0 331 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 IZUMO2Q6UXV1 221 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 RTKN2Q8IZC4 609 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 PCYOX1LQ8NBM8 494 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 MYLK2Q9H1R3 596 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 SYCE1LA8MT33 242 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 AHCYL1O43865 530 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 POLBP06746 335 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 ABHD2P08910 425 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 THRAP10827 490 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 ERFP50548 548 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 PSMD7P51665 324 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 VCPP55072 806 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 IL1RL1Q01638 556 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 FUT2Q10981 343 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 FLOT2Q14254 428 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 IL17AQ16552 155 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 FASTKD1Q53R41 847 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 EFHC1Q5JVL4 640 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 GADL1Q6ZQY3 521 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 LCA5Q86VQ0 697 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 FAM71DQ8N9W8 422 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 PGBD4Q96DM1 585 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 FSD1LQ9BXM9 530 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 RTFDC1Q9BY42 306 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 KLHL4Q9C0H6 718 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 DNAJC18Q9H819 358 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 SPC25Q9HBM1 224 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 KCNH7Q9NS40 1196 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 CNTNAP4Q9C0A0 1308 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 C16orf96A6NNT2 1141 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 H2AFYO75367 372 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 HSPA1AP0DMV8 641 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 HSPA1BP0DMV9 641 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 ALADP13716 330 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 RFC5P40937 340 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 LRRC74BQ6ZQY2 392 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 RASGEF1CQ8N431 466 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 ZCCHC9Q8N567 271 aaKnown RBP10.83□□□□□ -0.68
PTPRM-205ENST00000577827 UBXN6Q9BZV1 441 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 ACAD9Q9H845 621 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 DCDC2Q9UHG0 476 aa10.83□□□□□ -0.68
PTPRM-205ENST00000577827 SLIT3O75094 1523 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 ARHGAP23Q9P227 1491 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 AIM2O14862 343 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 CYTH3O43739 400 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 APBA3O96018 575 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 YWHAHQ04917 246 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-205ENST00000577827 MXD4Q14582 209 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-205ENST00000577827 PARP6Q2NL67 630 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 SPOCD1Q6ZMY3 1216 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 CBWD2Q8IUF1 395 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 MCOLN2Q8IZK6 566 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 CBWD1Q9BRT8 395 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 UNC45AQ9H3U1 944 aa10.82□□□□□ -0.68
PTPRM-205ENST00000577827 STX18Q9P2W9 335 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms