RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 TMC2Q8TDI7 906 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 C2orf15Q8WU43 125 aaKnown RBP28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 TCEAL4Q96EI5 215 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 TMLHEQ9NVH6 421 aa28.32■■■□□ 2.12
PPP4R1-204ENST00000577393 ZNF197O14709 1029 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 KINO60870 393 aaKnown RBP28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 CEBPBP17676 345 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 CCR2P41597 374 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 PRCPP42785 496 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 TUFMP49411 452 aaKnown RBP28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 MYL6P60660 151 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 BIRC3Q13489 604 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 MGAT5BQ3V5L5 792 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 ZCWPW2Q504Y3 356 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 TDRD10Q5VZ19 366 aaKnown RBP28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 SPPL2BQ8TCT7 592 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 KBTBD7Q8WVZ9 684 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 PBXIP1Q96AQ6 731 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 MCRS1Q96EZ8 462 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 MMS19Q96T76 1030 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 SEPT5Q99719 369 aaPredicted RBP28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 ASAH2Q9NR71 780 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 ABI2Q9NYB9 513 aaPredicted RBP28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 DUSP12Q9UNI6 340 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 NUMBLQ9Y6R0 609 aa28.31■■■□□ 2.12
PPP4R1-204ENST00000577393 NRG2O14511 850 aaPredicted RBP28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 MAPK13O15264 365 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 HCRTO43612 131 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 AKAP3O75969 853 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 C4BPAP04003 597 aaKnown RBP28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 MYL4P12829 197 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 RPL13P26373 211 aaKnown RBP28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 EPHA5P54756 1037 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 INTS6LQ5JSJ4 861 aaKnown RBP28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 POTEHQ6S545 545 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 PARM1Q6UWI2 310 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 LEMD2Q8NC56 503 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 FGF14Q92915 247 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 PCDHB5Q9Y5E4 795 aa28.3■■■□□ 2.12
PPP4R1-204ENST00000577393 NARSO43776 548 aaKnown RBP28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 MICAL2O94851 1124 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 STAU1O95793 577 aaKnown RBP28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 HAPLN1P10915 354 aaPredicted RBP28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 PCSK1P29120 753 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 ATICP31939 592 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 ADAM9Q13443 819 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 NFE2Q16621 373 aaPredicted RBP28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 WDR72Q3MJ13 1102 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 PKMYT1Q99640 499 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 RPP25Q9BUL9 199 aaKnown RBP28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 LRRC3Q9BY71 257 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 XYLT2Q9H1B5 865 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 GDE1Q9NZC3 331 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 RAPGEFL1Q9UHV5 662 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 ASB3Q9Y575 518 aa28.29■■■□□ 2.12
PPP4R1-204ENST00000577393 MOSPD3O75425 235 aa28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 WARSP23381 471 aaKnown RBP28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 LMO2P25791 158 aa28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 EDRF1Q3B7T1 1238 aa28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 COBLL1Q53SF7 1204 aa28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 MTSS1LQ765P7 747 aa28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 DNAJB7Q7Z6W7 309 aaPredicted RBP28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 SYAP1Q96A49 352 aaPredicted RBP28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 LPIN3Q9BQK8 851 aa28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 GTF3C4Q9UKN8 822 aa28.28■■■□□ 2.12
PPP4R1-204ENST00000577393 VNN1O95497 513 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 ATF6P18850 670 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 PSMC2P35998 433 aaKnown RBP28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 VAMP7P51809 220 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 TNNC1P63316 161 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 NCOA4Q13772 614 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 C1orf220Q5T0J3 134 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 TMC8Q8IU68 726 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 FAM186BQ8IYM0 893 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 PSMG2Q969U7 264 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 MRPL45Q9BRJ2 306 aaKnown RBP28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 PI4K2AQ9BTU6 479 aa28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 GTPBP4Q9BZE4 634 aaKnown RBP28.27■■■□□ 2.12
PPP4R1-204ENST00000577393 IKBKBO14920 756 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 GJA1P17302 382 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 CCDC142Q17RM4 750 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 ZACNQ401N2 412 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 ISM2Q6H9L7 571 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 INTS8Q75QN2 995 aaKnown RBP28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 ITIH5Q86UX2 942 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 FAM200AQ8TCP9 573 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 SYT15Q9BQS2 421 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 NXF1Q9UBU9 619 aaKnown RBP28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 MAN1B1Q9UKM7 699 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 CDH9Q9ULB4 789 aa28.26■■■□□ 2.11
PPP4R1-204ENST00000577393 MYBPHLA2RUH7 354 aa28.25■■■□□ 2.11
PPP4R1-204ENST00000577393 ATP2C2O75185 946 aa28.25■■■□□ 2.11
PPP4R1-204ENST00000577393 TACC1O75410 805 aa28.25■■■□□ 2.11
PPP4R1-204ENST00000577393 PDGFBP01127 241 aaPredicted RBP28.25■■■□□ 2.11
PPP4R1-204ENST00000577393 PDGFRBP09619 1106 aa28.25■■■□□ 2.11
PPP4R1-204ENST00000577393 FAM163BP0C2L3 166 aa28.25■■■□□ 2.11
PPP4R1-204ENST00000577393 KRT13P13646 458 aa28.25■■■□□ 2.11
PPP4R1-204ENST00000577393 VEPH1Q14D04 833 aa28.25■■■□□ 2.11
PPP4R1-204ENST00000577393 FAM171BQ6P995 826 aa28.25■■■□□ 2.11
PPP4R1-204ENST00000577393 SV2AQ7L0J3 742 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms