RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 GTPBP10A4D1E9 387 aaKnown RBP18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 KIF19Q2TAC6 998 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 LAYNQ6UX15 382 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 CCDC68Q9H2F9 335 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 CNOT7Q9UIV1 285 aaKnown RBP18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 APOEP02649 317 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 PRKCIP41743 596 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 CENPCQ03188 943 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 YTHDF3Q7Z739 585 aaKnown RBP18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 EPS8L1Q8TE68 723 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 EFHD1Q9BUP0 239 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 DCLK3Q9C098 648 aa18.73■□□□□ 0.59
ATPAF1-214ENST00000576409 STAT5BP51692 787 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 CUL2Q13617 745 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 FASTKD1Q53R41 847 aaKnown RBP18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 FSCBQ5H9T9 825 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 SGF29Q96ES7 293 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 DCLRE1BQ9H816 532 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 MTO1Q9Y2Z2 717 aaKnown RBP18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 SNX9Q9Y5X1 595 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 SHOX2O60902 331 aaPredicted RBP18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 PROSCO94903 275 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 AQP5P55064 265 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 PIGHQ14442 188 aaPredicted RBP18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 TKFCQ3LXA3 575 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 CATSPER4Q7RTX7 472 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 SLC51AQ86UW1 340 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 MTMR12Q9C0I1 747 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 RARRES1P49788 294 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 KRT27Q7Z3Y8 459 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 PPIL6Q8IXY8 311 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 PAPOLBQ9NRJ5 636 aaKnown RBP18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 BFARQ9NZS9 450 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 KCND2Q9NZV8 630 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 PCDHA3Q9Y5H8 950 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 IGSF9BQ9UPX0 1349 aa18.72■□□□□ 0.59
ATPAF1-214ENST00000576409 P4HA2O15460 535 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 RPA3P35244 121 aaPredicted RBP18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 EMC2Q15006 297 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 STRIP1Q5VSL9 837 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 CIAPIN1Q6FI81 312 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 IFNEQ86WN2 208 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 SPOCK2Q92563 424 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 ATG4CQ96DT6 458 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 HES6Q96HZ4 224 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 CCDC138Q96M89 665 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 TMEM120AQ9BXJ8 343 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 SH3BP5O60239 455 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 SURF1Q15526 300 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 XKR3Q5GH77 459 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 FAM182AQ5T1J6 154 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 ZCCHC23Q6ZST2 131 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 MCOLN2Q8IZK6 566 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 SNRNP27Q8WVK2 155 aaKnown RBP18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 ATP6V1E2Q96A05 226 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 ALKBH8Q96BT7 664 aaKnown RBP18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 EME2A4GXA9 379 aaPredicted RBP18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 APOL1O14791 398 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 TGFB1I1O43294 461 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 ATP9AO75110 1047 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 PRKCBP05771 671 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 RFC5P40937 340 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 RHBDL3P58872 404 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 RASA2Q15283 850 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 TEX9Q8N6V9 391 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 ZNF384Q8TF68 577 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 LRRN4Q8WUT4 740 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 PURBQ96QR8 312 aaKnown RBP18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 KIAA1683Q9H0B3 1180 aa18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 TSR3Q9UJK0 312 aaKnown RBP18.71■□□□□ 0.59
ATPAF1-214ENST00000576409 A8MXQ7 604 aa18.71■□□□□ 0.58
ATPAF1-214ENST00000576409 SWT1Q5T5J6 900 aaKnown RBP18.71■□□□□ 0.58
ATPAF1-214ENST00000576409 ZBTB45Q96K62 511 aaPredicted RBP18.71■□□□□ 0.58
ATPAF1-214ENST00000576409 ANKRD63C9JTQ0 380 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 MEIS2O14770 477 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 CCNG2Q16589 344 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 ACAD11Q709F0 780 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 CPNE8Q86YQ8 564 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 RNF148Q8N7C7 305 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 TTLL6Q8N841 843 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 DDX50Q9BQ39 737 aaKnown RBP18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 C12orf65Q9H3J6 166 aaKnown RBP18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 GRIN2DO15399 1336 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 TNS2Q63HR2 1409 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 F8VP50 259 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 HNRNPCP07910 306 aaKnown RBP eCLIP18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 TNFRSF8P28908 595 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 IZUMO2Q6UXV1 221 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 CRAMP1Q96RY5 1269 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 TSPYL2Q9H2G4 693 aaPredicted RBP18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 AURKCQ9UQB9 309 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 DNAJC8O75937 253 aaPredicted RBP18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 MORF4L2Q15014 288 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 USP33Q8TEY7 942 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 PACSIN3Q9UKS6 424 aa18.7■□□□□ 0.58
ATPAF1-214ENST00000576409 O00370 1275 aa18.69■□□□□ 0.58
ATPAF1-214ENST00000576409 XPO1O14980 1071 aaKnown RBP18.69■□□□□ 0.58
ATPAF1-214ENST00000576409 TPST1O60507 370 aa18.69■□□□□ 0.58
ATPAF1-214ENST00000576409 COBLL1Q53SF7 1204 aa18.69■□□□□ 0.58
ATPAF1-214ENST00000576409 THEMIS2Q5TEJ8 643 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms