RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 CLEC17AQ6ZS10 378 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 ITFG1Q8TB96 612 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 NXPE3Q969Y0 559 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 IPO9Q96P70 1041 aaKnown RBP25.19■■□□□ 1.62
SNF8-217ENST00000576353 CRISPLD1Q9H336 500 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 CEP72Q9P209 647 aa25.19■■□□□ 1.62
SNF8-217ENST00000576353 DENND4AQ7Z401 1863 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 WARSP23381 471 aaKnown RBP25.18■■□□□ 1.62
SNF8-217ENST00000576353 FKBP3Q00688 224 aaKnown RBP25.18■■□□□ 1.62
SNF8-217ENST00000576353 LRRC63Q05C16 580 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 NCOA4Q13772 614 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 ZACNQ401N2 412 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 INTS6LQ5JSJ4 861 aaKnown RBP25.18■■□□□ 1.62
SNF8-217ENST00000576353 UBALD2Q8IYN6 164 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 FGF13Q92913 245 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 DHTKD1Q96HY7 919 aaPredicted RBP25.18■■□□□ 1.62
SNF8-217ENST00000576353 XYLT2Q9H1B5 865 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 VRTNQ9H8Y1 702 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 KCNK12Q9HB15 430 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 ASB3Q9Y575 518 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 PCDHB5Q9Y5E4 795 aa25.18■■□□□ 1.62
SNF8-217ENST00000576353 TACC1O75410 805 aa25.17■■□□□ 1.62
SNF8-217ENST00000576353 MICAL2O94851 1124 aa25.17■■□□□ 1.62
SNF8-217ENST00000576353 EPB41P11171 864 aaKnown RBP25.17■■□□□ 1.62
SNF8-217ENST00000576353 MGAT5BQ3V5L5 792 aa25.17■■□□□ 1.62
SNF8-217ENST00000576353 ANKRD40Q6AI12 368 aa25.17■■□□□ 1.62
SNF8-217ENST00000576353 PDZD4Q76G19 769 aaPredicted RBP25.17■■□□□ 1.62
SNF8-217ENST00000576353 SV2AQ7L0J3 742 aa25.17■■□□□ 1.62
SNF8-217ENST00000576353 OSTM1Q86WC4 334 aa25.17■■□□□ 1.62
SNF8-217ENST00000576353 KBTBD7Q8WVZ9 684 aa25.17■■□□□ 1.62
SNF8-217ENST00000576353 SEPT5Q99719 369 aaPredicted RBP25.17■■□□□ 1.62
SNF8-217ENST00000576353 ASAH2Q9NR71 780 aa25.17■■□□□ 1.62
SNF8-217ENST00000576353 ABI2Q9NYB9 513 aaPredicted RBP25.17■■□□□ 1.62
SNF8-217ENST00000576353 CLSTN1O94985 981 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 ACAT1P24752 427 aaKnown RBP25.16■■□□□ 1.62
SNF8-217ENST00000576353 TDGQ13569 410 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 MORC3Q14149 939 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 SGSM1Q2NKQ1 1148 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 ZNF699Q32M78 642 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 C1orf220Q5T0J3 134 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 TRIM67Q6ZTA4 783 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 ITIH5Q86UX2 942 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 TTC9BQ8N6N2 239 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 TAF4BQ92750 862 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 SNX25Q9H3E2 840 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 NXF1Q9UBU9 619 aaKnown RBP25.16■■□□□ 1.62
SNF8-217ENST00000576353 CDH9Q9ULB4 789 aa25.16■■□□□ 1.62
SNF8-217ENST00000576353 VNN1O95497 513 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 HAPLN1P10915 354 aaPredicted RBP25.15■■□□□ 1.62
SNF8-217ENST00000576353 CCNE1P24864 410 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 GNL1P36915 607 aaPredicted RBP25.15■■□□□ 1.62
SNF8-217ENST00000576353 EPHA5P54756 1037 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 MCCD1P59942 119 aaPredicted RBP25.15■■□□□ 1.62
SNF8-217ENST00000576353 SIGLEC14Q08ET2 396 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 VEPH1Q14D04 833 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 SLC5A9Q2M3M2 681 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 ZNF667Q5HYK9 610 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 NPAS3Q8IXF0 933 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 EEF2KMTQ96G04 330 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 ABCB6Q9NP58 842 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 C11orf16Q9NQ32 467 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 TMLHEQ9NVH6 421 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 GDE1Q9NZC3 331 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 GTF3C4Q9UKN8 822 aa25.15■■□□□ 1.62
SNF8-217ENST00000576353 TSC2P49815 1807 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 FAM86C2PA6NEL3 165 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 PRR33A8MZF0 331 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 ANHXE9PGG2 379 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 BIN1O00499 593 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 SLC16A3O15427 465 aaKnown RBP25.14■■□□□ 1.62
SNF8-217ENST00000576353 STX10O60499 249 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 MYL4P12829 197 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 P4HA1P13674 534 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 GTF2H1P32780 548 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 PMS1P54277 932 aaKnown RBP25.14■■□□□ 1.62
SNF8-217ENST00000576353 MAPRE1Q15691 268 aaKnown RBP25.14■■□□□ 1.62
SNF8-217ENST00000576353 PRSS36Q5K4E3 855 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 ZC3H3Q8IXZ2 948 aaKnown RBP25.14■■□□□ 1.62
SNF8-217ENST00000576353 TRIML1Q8N9V2 468 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 OR6B3Q8NGW1 331 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 FAM200AQ8TCP9 573 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 PSMG2Q969U7 264 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 PKMYT1Q99640 499 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 SYT15Q9BQS2 421 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 MRPL45Q9BRJ2 306 aaKnown RBP25.14■■□□□ 1.62
SNF8-217ENST00000576353 DNAJC25Q9H1X3 360 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 KIAA1468Q9P260 1216 aa25.14■■□□□ 1.62
SNF8-217ENST00000576353 SOAT2O75908 522 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 PDGFRBP09619 1106 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 TRIM49P0CI25 452 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 TRIM49CP0CI26 452 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 BMP6P22004 513 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 LMO2P25791 158 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 PIK3CAP42336 1068 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 GCLMP48507 274 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 CDR1P51861 262 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 CAMK4Q16566 473 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 FAM171BQ6P995 826 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 C4orf50Q6ZRC1 276 aa25.13■■□□□ 1.61
SNF8-217ENST00000576353 MTSS1LQ765P7 747 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms