RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 BIN1O00499 593 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 HCRTO43612 131 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 SOAT2O75908 522 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 RHOP08100 348 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 TRIM49P0CI25 452 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 TRIM49CP0CI26 452 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 KRT13P13646 458 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 PSMC2P35998 433 aaKnown RBP14.22□□□□□ -0.13
RPAIN-216ENST00000575599 VAMP7P51809 220 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 AP3M2P53677 418 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 MYL6P60660 151 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 TNNC1P63316 161 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 MYL7Q01449 175 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 STIM1Q13586 685 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 PTPN21Q16825 1174 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 SOWAHAQ2M3V2 549 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 EDRF1Q3B7T1 1238 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 COBLL1Q53SF7 1204 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 CENPPQ6IPU0 288 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 OSTM1Q86WC4 334 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 SEPT5Q99719 369 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-216ENST00000575599 CORO1BQ9BR76 489 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 C1QTNF1Q9BXJ1 281 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 GTPBP4Q9BZE4 634 aaKnown RBP14.22□□□□□ -0.13
RPAIN-216ENST00000575599 MMRN2Q9H8L6 949 aa14.22□□□□□ -0.13
RPAIN-216ENST00000575599 ABI2Q9NYB9 513 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-216ENST00000575599 PSMA7O14818 248 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 CETN3O15182 167 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 MAPK13O15264 365 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 C4BPAP04003 597 aaKnown RBP14.21□□□□□ -0.14
RPAIN-216ENST00000575599 PTPN2P17706 415 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 ALDH1A3P47895 512 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 LHX1P48742 406 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 PMS1P54277 932 aaKnown RBP14.21□□□□□ -0.14
RPAIN-216ENST00000575599 EMP3P54852 163 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 CLDN10P78369 228 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 PLD1Q13393 1074 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 ZNF699Q32M78 642 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 WDR72Q3MJ13 1102 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 MGAT5BQ3V5L5 792 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 IQCEQ6IPM2 695 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 KLHL10Q6JEL2 608 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 INTS8Q75QN2 995 aaKnown RBP14.21□□□□□ -0.14
RPAIN-216ENST00000575599 LRRTM3Q86VH5 581 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 DCP1BQ8IZD4 617 aaKnown RBP14.21□□□□□ -0.14
RPAIN-216ENST00000575599 ADSSL1Q8N142 457 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 ST13P5Q8NFI4 369 aaPredicted RBP14.21□□□□□ -0.14
RPAIN-216ENST00000575599 ITFG1Q8TB96 612 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 ING5Q8WYH8 240 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 ELMO3Q96BJ8 720 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 ZNF512Q96ME7 567 aaPredicted RBP14.21□□□□□ -0.14
RPAIN-216ENST00000575599 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.21□□□□□ -0.14
RPAIN-216ENST00000575599 CEP72Q9P209 647 aa14.21□□□□□ -0.14
RPAIN-216ENST00000575599 NXF1Q9UBU9 619 aaKnown RBP14.21□□□□□ -0.14
RPAIN-216ENST00000575599 MRPS23Q9Y3D9 190 aaKnown RBP14.21□□□□□ -0.14
RPAIN-216ENST00000575599 BDP1A6H8Y1 2624 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 DOCK8Q8NF50 2099 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 EPB41P11171 864 aaKnown RBP14.2□□□□□ -0.14
RPAIN-216ENST00000575599 PCSK1P29120 753 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 ATICP31939 592 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 PIK3CAP42336 1068 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 EPHB3P54753 998 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 PSMC1P62191 440 aaKnown RBP14.2□□□□□ -0.14
RPAIN-216ENST00000575599 MTMR3Q13615 1198 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 NCOA4Q13772 614 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 SLC5A9Q2M3M2 681 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 ZSCAN23Q3MJ62 389 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 INTS6LQ5JSJ4 861 aaKnown RBP14.2□□□□□ -0.14
RPAIN-216ENST00000575599 ANKRD40Q6AI12 368 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 SASS6Q6UVJ0 657 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 PDZD4Q76G19 769 aaPredicted RBP14.2□□□□□ -0.14
RPAIN-216ENST00000575599 DPH6Q7L8W6 267 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 SPATA18Q8TC71 538 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 FAM200AQ8TCP9 573 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 KBTBD7Q8WVZ9 684 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 FGF13Q92913 245 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 ACBD6Q9BR61 282 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 MRPL45Q9BRJ2 306 aaKnown RBP14.2□□□□□ -0.14
RPAIN-216ENST00000575599 XYLT2Q9H1B5 865 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 SMOC2Q9H3U7 446 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 TMLHEQ9NVH6 421 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 EPS15L1Q9UBC2 864 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 CDH7Q9ULB5 785 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 SORCS3Q9UPU3 1222 aa14.2□□□□□ -0.14
RPAIN-216ENST00000575599 NOTCH4Q99466 2003 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 SYCE3A1L190 88 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 GABRDO14764 452 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 IKBKBO14920 756 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 VNN1O95497 513 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 MYL4P12829 197 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 LAMP2P13473 410 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 BMP6P22004 513 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 WARSP23381 471 aaKnown RBP14.19□□□□□ -0.14
RPAIN-216ENST00000575599 LMO2P25791 158 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 GCLMP48507 274 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 ZXDAP98168 799 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 LRRC63Q05C16 580 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 SMARCB1Q12824 385 aa14.19□□□□□ -0.14
RPAIN-216ENST00000575599 MORC3Q14149 939 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms