RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 MUTYHQ9UIF7 546 aa14.56□□□□□ -0.08
CIITA-210ENST00000575513 PPP1R3GB7ZBB8 358 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 ZNF197O14709 1029 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 STX10O60499 249 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 GPR37L1O60883 481 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 RHOP08100 348 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 EPB41P11171 864 aaKnown RBP14.55□□□□□ -0.08
CIITA-210ENST00000575513 LAMP2P13473 410 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 BMP6P22004 513 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 GBP2P32456 591 aaPredicted RBP14.55□□□□□ -0.08
CIITA-210ENST00000575513 EPHB3P54753 998 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 EPHA5P54756 1037 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 MYL6P60660 151 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 TNNC1P63316 161 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 TWF1Q12792 350 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 PTPN21Q16825 1174 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 INTS6LQ5JSJ4 861 aaKnown RBP14.55□□□□□ -0.08
CIITA-210ENST00000575513 FAM171BQ6P995 826 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 UBALD2Q8IYN6 164 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 KBTBD7Q8WVZ9 684 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 EDAQ92838 391 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 PGLYRP2Q96PD5 576 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 MYADMQ96S97 322 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 MMS19Q96T76 1030 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 PKMYT1Q99640 499 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 GDE1Q9NZC3 331 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 CEP72Q9P209 647 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 CDH9Q9ULB4 789 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 CDH7Q9ULB5 785 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 SORCS3Q9UPU3 1222 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 YIPF1Q9Y548 306 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 PCDHB5Q9Y5E4 795 aa14.55□□□□□ -0.08
CIITA-210ENST00000575513 BICDL2A1A5D9 508 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 VNN1O95497 513 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 P4HA1P13674 534 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 SP100P23497 879 aaPredicted RBP14.54□□□□□ -0.08
CIITA-210ENST00000575513 GNL1P36915 607 aaPredicted RBP14.54□□□□□ -0.08
CIITA-210ENST00000575513 PMS1P54277 932 aaKnown RBP14.54□□□□□ -0.08
CIITA-210ENST00000575513 ZXDAP98168 799 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 MAPRE1Q15691 268 aaKnown RBP14.54□□□□□ -0.08
CIITA-210ENST00000575513 ZNF667Q5HYK9 610 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 CYP4A22Q5TCH4 519 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 ITIH5Q86UX2 942 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 FGF13Q92913 245 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 FUBP3Q96I24 572 aaKnown RBP eCLIP14.54□□□□□ -0.08
CIITA-210ENST00000575513 FAXDC2Q96IV6 333 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 CEP63Q96MT8 703 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 CRISPLD1Q9H336 500 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 CLSTN2Q9H4D0 955 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 TMEM8AQ9HCN3 771 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 HCFC1R1Q9NWW0 138 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 SLC27A5Q9Y2P5 690 aa14.54□□□□□ -0.08
CIITA-210ENST00000575513 MRPS23Q9Y3D9 190 aaKnown RBP14.54□□□□□ -0.08
CIITA-210ENST00000575513 ANHXE9PGG2 379 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 FGF19O95750 216 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 ASS1P00966 412 aaKnown RBP14.53□□□□□ -0.08
CIITA-210ENST00000575513 HAPLN1P10915 354 aaPredicted RBP14.53□□□□□ -0.08
CIITA-210ENST00000575513 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
CIITA-210ENST00000575513 NTHL1P78549 312 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 MTMR3Q13615 1198 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 CAMK4Q16566 473 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 ZNF699Q32M78 642 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 CFAP221Q4G0U5 840 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 PRSS36Q5K4E3 855 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 KRT39Q6A163 491 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 ISM2Q6H9L7 571 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 GET4Q7L5D6 327 aaPredicted RBP14.53□□□□□ -0.08
CIITA-210ENST00000575513 FILIP1Q7Z7B0 1213 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 OSTM1Q86WC4 334 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 PSMG2Q969U7 264 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 CEP295NLQ96MC4 621 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 CORO1BQ9BR76 489 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 SNX25Q9H3E2 840 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 KCNK12Q9HB15 430 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 METTL14Q9HCE5 456 aaKnown RBP14.53□□□□□ -0.08
CIITA-210ENST00000575513 ASAH2Q9NR71 780 aa14.53□□□□□ -0.08
CIITA-210ENST00000575513 MBD3O95983 291 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 LMO2P25791 158 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 GCLMP48507 274 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 PPP3CAQ08209 521 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 TDGQ13569 410 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 MGAT5BQ3V5L5 792 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 TMEM31Q5JXX7 168 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 TTI2Q6NXR4 508 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 C4orf50Q6ZRC1 276 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 PDZD4Q76G19 769 aaPredicted RBP14.52□□□□□ -0.09
CIITA-210ENST00000575513 FRMD5Q7Z6J6 570 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 DNAJB7Q7Z6W7 309 aaPredicted RBP14.52□□□□□ -0.09
CIITA-210ENST00000575513 ITFG1Q8TB96 612 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 LRRC3Q9BY71 257 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 IMPG2Q9BZV3 1241 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 GPR88Q9GZN0 384 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 DNAJC25Q9H1X3 360 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 TMLHEQ9NVH6 421 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 NXF1Q9UBU9 619 aaKnown RBP14.52□□□□□ -0.09
CIITA-210ENST00000575513 ARMCX3Q9UH62 379 aaPredicted RBP14.52□□□□□ -0.09
CIITA-210ENST00000575513 GTF3C4Q9UKN8 822 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 C2orf16Q68DN1 1984 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 DENND4AQ7Z401 1863 aa14.52□□□□□ -0.09
CIITA-210ENST00000575513 MYBPHLA2RUH7 354 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms