RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TMEM9BQ9NQ34 198 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 TDP1Q9NUW8 608 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 KCND2Q9NZV8 630 aa9.76□□□□□ -0.85
SMG6-218ENST00000575454 LAD1O00515 517 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 DTNBO60941 627 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 EGFP01133 1207 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 MAPTP10636 758 aaKnown RBP9.75□□□□□ -0.85
SMG6-218ENST00000575454 GBP1P32455 592 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 GALK1P51570 392 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 CYP4F8P98187 520 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 NR1H3Q13133 447 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 ZNF268Q14587 947 aaPredicted RBP9.75□□□□□ -0.85
SMG6-218ENST00000575454 SLC39A12Q504Y0 691 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 SEZ6Q53EL9 994 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 SPATA1Q5VX52 437 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 TCEAL6Q6IPX3 200 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 PKN3Q6P5Z2 889 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 DCP1BQ8IZD4 617 aaKnown RBP9.75□□□□□ -0.85
SMG6-218ENST00000575454 CPA6Q8N4T0 437 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 SPPL2BQ8TCT7 592 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 MRPS31Q92665 395 aaKnown RBP9.75□□□□□ -0.85
SMG6-218ENST00000575454 TCEAL3Q969E4 200 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 BICD1Q96G01 975 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 C8orf76Q96K31 380 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 SENP8Q96LD8 212 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 HHIPQ96QV1 700 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 RUSC1Q9BVN2 902 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 ADAM33Q9BZ11 813 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 ZCWPW1Q9H0M4 648 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 SMOC1Q9H4F8 434 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 EBF3Q9H4W6 596 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 SLC32A1Q9H598 525 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 RPF1Q9H9Y2 349 aaKnown RBP9.75□□□□□ -0.85
SMG6-218ENST00000575454 IL21Q9HBE4 155 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 HPS4Q9NQG7 708 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 LARSQ9P2J5 1176 aaKnown RBP9.75□□□□□ -0.85
SMG6-218ENST00000575454 IGSF10Q6WRI0 2623 aa9.75□□□□□ -0.85
SMG6-218ENST00000575454 LNP1A1A4G5 178 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 LACTBL1A8MY62 500 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 E9PMD0 336 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 JAK2O60674 1132 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 SOAT2O75908 522 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 CYP11A1P05108 521 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 ADRB2P07550 413 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 HOXC13P31276 330 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 ABCD1P33897 745 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 RDXP35241 583 aaKnown RBP9.74□□□□□ -0.85
SMG6-218ENST00000575454 FOSBP53539 338 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 SPAG1Q07617 926 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 LMAN2Q12907 356 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 MAPK7Q13164 816 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 DMC1Q14565 340 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 MON1AQ86VX9 555 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 C4orf32Q8N8J7 132 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 TSTD1Q8NFU3 115 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 RPLP0P6Q8NHW5 317 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 KCNN1Q92952 543 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 USP13Q92995 863 aaPredicted RBP9.74□□□□□ -0.85
SMG6-218ENST00000575454 CD101Q93033 1021 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 ATP2A3Q93084 1043 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 LPIN3Q9BQK8 851 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 SMG9Q9H0W8 520 aaKnown RBP9.74□□□□□ -0.85
SMG6-218ENST00000575454 TBX20Q9UMR3 447 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 WASF3Q9UPY6 502 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 DERAQ9Y315 318 aa9.74□□□□□ -0.85
SMG6-218ENST00000575454 SFI1A8K8P3 1242 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 GIPC1O14908 333 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 HNRNPDLO14979 420 aaKnown RBP9.73□□□□□ -0.85
SMG6-218ENST00000575454 DCLK1O15075 740 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 OGTO15294 1046 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 EIF5BO60841 1220 aaKnown RBP9.73□□□□□ -0.85
SMG6-218ENST00000575454 F11P03951 625 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 CSH1P0DML2 217 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 CSH2P0DML3 217 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 HAPLN1P10915 354 aaPredicted RBP9.73□□□□□ -0.85
SMG6-218ENST00000575454 ATF6P18850 670 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 CDC25AP30304 524 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 GJA4P35212 333 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 DPP6P42658 865 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 LIG4P49917 911 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 DGKEP52429 567 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 NLRP12P59046 1061 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 GUCY1B3Q02153 619 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 ENOX2Q16206 610 aaKnown RBP9.73□□□□□ -0.85
SMG6-218ENST00000575454 NFE2Q16621 373 aaPredicted RBP9.73□□□□□ -0.85
SMG6-218ENST00000575454 C9orf57Q5W0N0 161 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 PMS2CLQ68D20 193 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 TRIM68Q6AZZ1 485 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 DTHD1Q6ZMT9 781 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 CYP2U1Q7Z449 544 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 TTC9BQ8N6N2 239 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 MAB21L3Q8N8X9 362 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 OR10T2Q8NGX3 314 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 GIPC2Q8TF65 315 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 OSCP1Q8WVF1 389 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 LLPHQ9BRT6 129 aaKnown RBP9.73□□□□□ -0.85
SMG6-218ENST00000575454 ECT2Q9H8V3 914 aa9.73□□□□□ -0.85
SMG6-218ENST00000575454 UXTQ9UBK9 157 aaPredicted RBP9.73□□□□□ -0.85
SMG6-218ENST00000575454 CCL26Q9Y258 94 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms