RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 DEPDC1BQ8WUY9 529 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 DNASE1L2Q92874 299 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 TMEM209Q96SK2 561 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 NELL2Q99435 816 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 LRRC3Q9BY71 257 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 OSBPL6Q9BZF3 934 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 DNAJC25Q9H1X3 360 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 CRISPLD1Q9H336 500 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 SIX4Q9UIU6 781 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 SNX9Q9Y5X1 595 aa17.73■□□□□ 0.43
TVP23B-206ENST00000574226 FAM163BP0C2L3 166 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 TNNI1P19237 187 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 CDC25CP30307 473 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 AP3M2P53677 418 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 MLF2Q15773 248 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-206ENST00000574226 TAF12Q16514 161 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 SLC44A4Q53GD3 710 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 ARHGAP15Q53QZ3 475 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 TMC8Q8IU68 726 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 NELFCDQ8IXH7 590 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 HS6ST3Q8IZP7 471 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 FAM200AQ8TCP9 573 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 ATOH1Q92858 354 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-206ENST00000574226 IRF7Q92985 503 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 HPDLQ96IR7 371 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 GCNAQ96QF7 691 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 CGRRF1Q99675 332 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 SEPT5Q99719 369 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-206ENST00000574226 TRMT61BQ9BVS5 477 aaKnown RBP17.72■□□□□ 0.43
TVP23B-206ENST00000574226 SLITRK6Q9H5Y7 841 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 TRPV5Q9NQA5 729 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 L1RE1Q9UN81 338 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 SIT1Q9Y3P8 196 aa17.72■□□□□ 0.43
TVP23B-206ENST00000574226 SOBPA7XYQ1 873 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 KLRC4O43908 158 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 EXOC3O60645 756 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 MOSPD3O75425 235 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 HAPLN1P10915 354 aaPredicted RBP17.71■□□□□ 0.43
TVP23B-206ENST00000574226 PSMC3P17980 439 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 CASP1P29466 404 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 WEE1P30291 646 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 MAGEA9P43362 315 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 CYP2J2P51589 502 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 RPL10AP62906 217 aaKnown RBP17.71■□□□□ 0.43
TVP23B-206ENST00000574226 CYP24A1Q07973 514 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 MAPRE1Q15691 268 aaKnown RBP17.71■□□□□ 0.43
TVP23B-206ENST00000574226 TANGO2Q6ICL3 276 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 TRAPPC11Q7Z392 1133 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 SLC9A9Q8IVB4 645 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 ADGRF2Q8IZF7 708 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 DTWD2Q8NBA8 298 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 SHKBP1Q8TBC3 707 aa17.71■□□□□ 0.43
TVP23B-206ENST00000574226 ZSCAN18Q8TBC5 510 aaPredicted RBP17.71■□□□□ 0.43
TVP23B-206ENST00000574226 FUBP3Q96I24 572 aaKnown RBP eCLIP17.71■□□□□ 0.43
TVP23B-206ENST00000574226 DDX23Q9BUQ8 820 aaKnown RBP17.71■□□□□ 0.43
TVP23B-206ENST00000574226 DDX43Q9NXZ2 648 aaKnown RBP17.71■□□□□ 0.43
TVP23B-206ENST00000574226 ABI2Q9NYB9 513 aaPredicted RBP17.71■□□□□ 0.43
TVP23B-206ENST00000574226 MRPS17Q9Y2R5 130 aaKnown RBP17.71■□□□□ 0.43
TVP23B-206ENST00000574226 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.7■□□□□ 0.42
TVP23B-206ENST00000574226 KANSL1LA0AUZ9 987 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 PDXKO00764 312 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 GABRDO14764 452 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 CLIC2O15247 247 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 NCAM2O15394 837 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 PI15O43692 258 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 DLATP10515 647 aaKnown RBP17.7■□□□□ 0.42
TVP23B-206ENST00000574226 FCARP24071 287 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 MRE11P49959 708 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 NUCB2P80303 420 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 TEAD2Q15562 447 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 KMT5BQ4FZB7 885 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 INTS6LQ5JSJ4 861 aaKnown RBP17.7■□□□□ 0.42
TVP23B-206ENST00000574226 LIMS2Q7Z4I7 341 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 LRRTM3Q86VH5 581 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 MFSD6LQ8IWD5 586 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 RDH13Q8NBN7 331 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 PJA1Q8NG27 643 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 OR5B17Q8NGF7 314 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 CEP295NLQ96MC4 621 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 BRD9Q9H8M2 597 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 OBP2AQ9NY56 170 aa17.7■□□□□ 0.42
TVP23B-206ENST00000574226 MIA3Q5JRA6 1907 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 A0A1W2PRU2 124 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 MAN2B1O00754 1011 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 STAU1O95793 577 aaKnown RBP17.69■□□□□ 0.42
TVP23B-206ENST00000574226 RPN1P04843 607 aaKnown RBP17.69■□□□□ 0.42
TVP23B-206ENST00000574226 CSH1P0DML2 217 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 CSH2P0DML3 217 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 GLULP15104 373 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 GABRR2P28476 465 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 ATICP31939 592 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 MLLT6P55198 1093 aaPredicted RBP17.69■□□□□ 0.42
TVP23B-206ENST00000574226 STK4Q13043 487 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 SNW1Q13573 536 aaKnown RBP17.69■□□□□ 0.42
TVP23B-206ENST00000574226 SOWAHAQ2M3V2 549 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 CFAP221Q4G0U5 840 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 C1orf228Q6PIY5 440 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 C4orf50Q6ZRC1 276 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 GRAMD1CQ8IYS0 662 aa17.69■□□□□ 0.42
TVP23B-206ENST00000574226 TTC9BQ8N6N2 239 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms