RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 SLC7A14Q8TBB6 771 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 ENOX1Q8TC92 643 aaKnown RBP13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 RHOBTB2Q9BYZ6 727 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 ZCWPW1Q9H0M4 648 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 S1PR5Q9H228 398 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 CDH9Q9ULB4 789 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 COQ4Q9Y3A0 265 aa13.66□□□□□ -0.22
TRAPPC1-206ENST00000573989 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 TPM2P07951 284 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 OR4Q2P0C623 313 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 TUFMP49411 452 aaKnown RBP13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 SMAD2Q15796 467 aaKnown RBP13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 CBWD6Q4V339 395 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 SLC39A12Q504Y0 691 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 INTS6LQ5JSJ4 861 aaKnown RBP13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 CBWD3Q5JTY5 395 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 CBWD5Q5RIA9 395 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 SCARA3Q6AZY7 606 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 TMC5Q6UXY8 1006 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 RNF19BQ6ZMZ0 732 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 GPR149Q86SP6 731 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 C12orf76Q8N812 135 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 ANKRD20A12PQ8NF67 263 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 OR10T2Q8NGX3 314 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 SPPL2BQ8TCT7 592 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 TNIP3Q96KP6 325 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 SYT15Q9BQS2 421 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 APOL5Q9BWW9 433 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 PRKD2Q9BZL6 878 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 NIF3L1Q9GZT8 377 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 FAM124BQ9H5Z6 455 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 CYP3A43Q9HB55 503 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 NFE2L3Q9Y4A8 694 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 USP15Q9Y4E8 981 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 C2orf16Q68DN1 1984 aa13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.22
TRAPPC1-206ENST00000573989 MTMR11A4FU01 709 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 A8MXQ7 604 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 RFPL2O75678 378 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 POU2F2P09086 479 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 PDGFRBP09619 1106 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 EEF1GP26641 437 aaKnown RBP13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 ALDH1A3P47895 512 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 KCNQ1P51787 676 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 YWHAEP62258 255 aaKnown RBP13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 MYL5Q02045 173 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 CBX2Q14781 532 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 SCARA5Q6ZMJ2 495 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 KBTBD7Q8WVZ9 684 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 SMG7Q92540 1137 aaKnown RBP13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 PGLYRP2Q96PD5 576 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 MED15Q96RN5 788 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 RTP3Q9BQQ7 232 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 MRPL45Q9BRJ2 306 aaKnown RBP13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 PI4K2AQ9BTU6 479 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 DNAJC25Q9H1X3 360 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 SMYD3Q9H7B4 428 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 PRKAG3Q9UGI9 489 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 POLIQ9UNA4 740 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 PCDHB5Q9Y5E4 795 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 INSL5Q9Y5Q6 135 aa13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 SPTBN5Q9NRC6 3674 aaKnown RBP13.64□□□□□ -0.23
TRAPPC1-206ENST00000573989 SYCE3A1L190 88 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 SMTNL1A8MU46 457 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 KCNJ18B7U540 433 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 PAPLNO95428 1278 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 TBXAS1P24557 533 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 ACAT1P24752 427 aaKnown RBP13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 DUSP4Q13115 394 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 KCNJ12Q14500 433 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 MAN2A1Q16706 1144 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 ANO6Q4KMQ2 910 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 IQCEQ6IPM2 695 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 SPOPLQ6IQ16 392 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 C11orf57Q6ZUT1 292 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 UNC93AQ86WB7 457 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 OSTM1Q86WC4 334 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 SPATA2LQ8IUW3 424 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 SUSD6Q92537 303 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 FUBP3Q96I24 572 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 NT5C1BQ96P26 610 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 TMEM209Q96SK2 561 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 BCO2Q9BYV7 579 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 ABCB6Q9NP58 842 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.63□□□□□ -0.232e-12■■■■■ 298.1
TRAPPC1-206ENST00000573989 ABI2Q9NYB9 513 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 NR2E1Q9Y466 385 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 MYH10P35580 1976 aa13.63□□□□□ -0.23
TRAPPC1-206ENST00000573989 PES1O00541 588 aaKnown RBP13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 CCL16O15467 120 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 SEC24AO95486 1093 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 CAVIN2O95810 425 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 WEE2P0C1S8 567 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 BMP1P13497 986 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 IL9P15248 144 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 LMO2P25791 158 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 ASPAP45381 313 aa13.62□□□□□ -0.23
TRAPPC1-206ENST00000573989 EPHB3P54753 998 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms