RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 ALKAL1Q6UXT8 129 aa10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 DTWD2Q8NBA8 298 aa10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 FGF13Q92913 245 aa10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 TMX3Q96JJ7 454 aa10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 IFT74Q96LB3 600 aa10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 ADPGKQ9BRR6 497 aa10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 ARHGEF3Q9NR81 526 aa10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 ZDHHC7Q9NXF8 308 aa10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 NOL7Q9UMY1 257 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-210ENST00000572824 SPTBN2O15020 2390 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 TMEM189-UBE2V1I3L0A0 370 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 K7ERI5 159 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 OR4Q2P0C623 313 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 CXCL8P10145 99 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 SRFP11831 508 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 GJA1P17302 382 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 HOXC13P31276 330 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 NBL1P41271 181 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 TRAPPC10P48553 1259 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 SLC12A3P55017 1021 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 ATP2C1P98194 919 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 SFSWAPQ12872 951 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 ORC2Q13416 577 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 SNW1Q13573 536 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 DHX8Q14562 1220 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 PPP2R5AQ15172 486 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 SLC10A6Q3KNW5 377 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 TMEM119Q4V9L6 283 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 XKR4Q5GH76 650 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 TMCO4Q5TGY1 634 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 LIN9Q5TKA1 542 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 SCARA3Q6AZY7 606 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 SLC39A4Q6P5W5 647 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 RGL4Q8IZJ4 473 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 TTC9BQ8N6N2 239 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 TMEM161BQ8NDZ6 487 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 KIFAP3Q92845 792 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 ZSCAN31Q96LW9 406 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 PLEKHA4Q9H4M7 779 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 KMT5AQ9NQR1 393 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 SH2B1Q9NRF2 756 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 FAM13BQ9NYF5 915 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 DLGAP2Q9P1A6 1054 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 IGSF9Q9P2J2 1179 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 ATXN7L1Q9ULK2 861 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 SSX2IPQ9Y2D8 614 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 TIMM13Q9Y5L4 95 aaPredicted RBP10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 DENND4CQ5VZ89 1909 aa10.09□□□□□ -0.79
NPLOC4-210ENST00000572824 ATG2BQ96BY7 2078 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 VSIG8P0DPA2 414 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 FCARP24071 287 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 MZF1P28698 734 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 CLCN5P51795 746 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 DNM1Q05193 864 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 DMP1Q13316 513 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 RAB33AQ14088 237 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 FAM173BQ6P4H8 233 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 USP49Q70CQ1 688 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 MAML2Q8IZL2 1156 aaPredicted RBP10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 GPR161Q8N6U8 529 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 HDAC7Q8WUI4 952 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 EDEM1Q92611 657 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 MCRS1Q96EZ8 462 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 TMEM209Q96SK2 561 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 MRPL4Q9BYD3 311 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 RHOBTB2Q9BYZ6 727 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 BLOC1S4Q9NUP1 217 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 CNTN3Q9P232 1028 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 FBXL5Q9UKA1 691 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 CDH7Q9ULB5 785 aa10.08□□□□□ -0.8
NPLOC4-210ENST00000572824 NUP210Q8TEM1 1887 aaPredicted RBP10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 PROB1E7EW31 1015 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 FAM189A1O60320 539 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 TBC1D4O60343 1298 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 MOSPD3O75425 235 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 SOAT2O75908 522 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 RHOP08100 348 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 PLA2G4BP0C869 781 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 EPB42P16452 691 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 EFNA5P52803 228 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 GRM2Q14416 872 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 PDIA5Q14554 519 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 NOLC1Q14978 699 aaKnown RBP eCLIP10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 KARSQ15046 597 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 PABPC1LQ4VXU2 614 aaKnown RBP10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 HYIQ5T013 277 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 KRT79Q5XKE5 535 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 DCLRE1AQ6PJP8 1040 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 MPZL3Q6UWV2 235 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 DTHD1Q6ZMT9 781 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 ZSWIM2Q8NEG5 633 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 STAMQ92783 540 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 RSPRY1Q96DX4 576 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 ZSWIM3Q96MP5 696 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 PRRX2Q99811 253 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 REEP2Q9BRK0 252 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 WNT16Q9UBV4 365 aa10.07□□□□□ -0.8
NPLOC4-210ENST00000572824 STK39Q9UEW8 545 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms