RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TM4SF1P30408 202 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ADSSP30520 456 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PSMC2P35998 433 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PAFAH1B1P43034 410 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ATP5OP48047 213 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 HNMTP50135 292 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 AFF1P51825 1210 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CABP4P57796 275 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CCNA1P78396 465 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 RING1Q06587 406 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 C19orf57Q0VDD7 668 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 RALGDSQ12967 914 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 RPA4Q13156 261 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 NOGQ13253 232 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SYCP1Q15431 976 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 GRIK5Q16478 980 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 IFI16Q16666 785 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 DPY19L1Q2PZI1 675 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 MAJINQ3KP22 176 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CCDC40Q4G0X9 1142 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PITRM1Q5JRX3 1037 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PLA2G2CQ5R387 149 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 FAXCQ5TGI0 409 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 KRT80Q6KB66 452 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 MTFR2Q6P444 385 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CCDC62Q6P9F0 684 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 HHIPL2Q6UWX4 724 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 FAM83HQ6ZRV2 1179 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 C15orf52Q6ZUT6 534 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 DENND5BQ6ZUT9 1274 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 IKBIPQ70UQ0 350 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 H1FNTQ75WM6 255 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 MIGA2Q7L4E1 593 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CHST3Q7LGC8 479 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ANKS1BQ7Z6G8 1248 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 WDR63Q8IWG1 891 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ZFPM1Q8IX07 1006 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 AGGF1Q8N302 714 aaeCLIP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 TDRD5Q8NAT2 981 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CCDC150Q8NCX0 1101 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 KIF18AQ8NI77 898 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SLC16A10Q8TF71 515 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 RTF1Q92541 710 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 KCNN1Q92952 543 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 KAT5Q92993 513 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 TUBGCP3Q96CW5 907 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 NMD3Q96D46 503 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 GIMAP5Q96F15 307 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PGAP3Q96FM1 320 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SIPA1Q96FS4 1042 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 COG3Q96JB2 828 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 VPS50Q96JG6 964 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ZNF396Q96N95 335 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 P2RX7Q99572 595 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 TEX12Q9BXU0 123 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 MAK16Q9BXY0 300 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 MUC13Q9H3R2 512 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SEMA6BQ9H3T3 888 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 IGFLR1Q9H665 355 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 C17orf75Q9HAS0 396 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 MKNK2Q9HBH9 465 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SENP2Q9HC62 589 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PDE11AQ9HCR9 933 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 ZNF304Q9HCX3 659 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 TIMMDC1Q9NPL8 285 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PFDN4Q9NQP4 134 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SIRT3Q9NTG7 399 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 TCP11L1Q9NUJ3 509 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 LMBRD1Q9NUN5 540 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 AATFQ9NY61 560 aaKnown RBP eCLIP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 TAS2R10Q9NYW0 307 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SELENONQ9NZV5 590 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 COX16Q9P0S2 106 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 PTBP2Q9UKA9 531 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 NOSIPQ9Y314 301 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 N6AMT1Q9Y5N5 214 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 CSADQ9Y600 493 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SESN1Q9Y6P5 492 aa5.39□□□□□ -1.55
TOPBP1-210ENST00000572787 SOX1O00570 391 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 C2CD2LO14523 706 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 FCHO1O14526 889 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 POLR3GO15318 223 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 SIN3BO75182 1162 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 PEX11AO75192 247 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 ADCY5O95622 1261 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 NDST3O95803 873 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 F9P00740 461 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 LRG1P02750 347 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 MT-ND5P03915 603 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 FAM157BP0CG42 384 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 SKILP12757 684 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 BMP1P13497 986 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 LCP1P13796 627 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 SNRPBP14678 240 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 NFKBIAP25963 317 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 GRK3P35626 688 aa5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 GNL1P36915 607 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 MTIF2P46199 727 aaKnown RBP5.38□□□□□ -1.55
TOPBP1-210ENST00000572787 LMAN1P49257 510 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms