RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 PDE11AQ9HCR9 933 aa18.67■□□□□ 0.58
LITAF-211ENST00000572255 TRPV5Q9NQA5 729 aa18.67■□□□□ 0.58
LITAF-211ENST00000572255 ITGA11Q9UKX5 1188 aa18.67■□□□□ 0.58
LITAF-211ENST00000572255 ZNF263O14978 683 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 KIAA0391O15091 583 aaKnown RBP18.66■□□□□ 0.58
LITAF-211ENST00000572255 ZSCAN22P10073 491 aaPredicted RBP18.66■□□□□ 0.58
LITAF-211ENST00000572255 GABRR2P28476 465 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 AMPD3Q01432 767 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 BFSP1Q12934 665 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 SCARA3Q6AZY7 606 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 DCP1BQ8IZD4 617 aaKnown RBP18.66■□□□□ 0.58
LITAF-211ENST00000572255 PDCL2Q8N4E4 241 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 CSGALNACT2Q8N6G5 542 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 LRRC52Q8N7C0 313 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 CXorf38Q8TB03 319 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 SEMA4AQ9H3S1 761 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 ABI2Q9NYB9 513 aaPredicted RBP18.66■□□□□ 0.58
LITAF-211ENST00000572255 L1RE1Q9UN81 338 aa18.66■□□□□ 0.58
LITAF-211ENST00000572255 MAN2B1O00754 1011 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 NCAM2O15394 837 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 LAMTOR5O43504 91 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 HUS1O60921 280 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 F13A1P00488 732 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 TMEM191BP0C7N4 346 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 HAPLN1P10915 354 aaPredicted RBP18.65■□□□□ 0.58
LITAF-211ENST00000572255 PDIA4P13667 645 aaKnown RBP18.65■□□□□ 0.58
LITAF-211ENST00000572255 HOXD13P35453 343 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 RPS9P46781 194 aaKnown RBP18.65■□□□□ 0.58
LITAF-211ENST00000572255 TSPY1Q01534 308 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 ARHGAP15Q53QZ3 475 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 GPR158Q5T848 1215 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 CNNM4Q6P4Q7 775 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 ZC3H14Q6PJT7 736 aaKnown RBP18.65■□□□□ 0.58
LITAF-211ENST00000572255 GPIHBP1Q8IV16 184 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 ARID3BQ8IVW6 561 aaPredicted RBP18.65■□□□□ 0.58
LITAF-211ENST00000572255 YAF2Q8IY57 180 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 ADSSL1Q8N142 457 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 KCNG4Q8TDN1 519 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 GIPC2Q8TF65 315 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 MTMR12Q9C0I1 747 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 SIX4Q9UIU6 781 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 NDRG2Q9UN36 371 aaKnown RBP18.65■□□□□ 0.58
LITAF-211ENST00000572255 PCDHB5Q9Y5E4 795 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 PIAS3Q9Y6X2 628 aa18.65■□□□□ 0.58
LITAF-211ENST00000572255 EP300Q09472 2414 aaPredicted RBP18.64■□□□□ 0.58
LITAF-211ENST00000572255 ARNTLO00327 626 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 EIF3DO15371 548 aaKnown RBP eCLIP18.64■□□□□ 0.57
LITAF-211ENST00000572255 KRT19P08727 400 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 RBP5P82980 135 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 FZD5Q13467 585 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 TAF12Q16514 161 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 FAM26FQ5R3K3 315 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 LMBRD2Q68DH5 695 aaPredicted RBP18.64■□□□□ 0.57
LITAF-211ENST00000572255 EPM2AIP1Q7L775 607 aaPredicted RBP18.64■□□□□ 0.57
LITAF-211ENST00000572255 ZNF687Q8N1G0 1237 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 C7orf25Q9BPX7 421 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 IL21Q9HBE4 155 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 TMLHEQ9NVH6 421 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 INTS13Q9NVM9 706 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 GDAP2Q9NXN4 497 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 FBXO4Q9UKT5 387 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 PTPRJQ12913 1337 aa18.64■□□□□ 0.57
LITAF-211ENST00000572255 ZNF233A6NK53 670 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 POLR2DO15514 142 aaKnown RBP18.63■□□□□ 0.57
LITAF-211ENST00000572255 LMNAP02545 664 aaKnown RBP18.63■□□□□ 0.57
LITAF-211ENST00000572255 CDC25CP30307 473 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 ME1P48163 572 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 CYP4F8P98187 520 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 FCHO2Q0JRZ9 810 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 NFE2Q16621 373 aaPredicted RBP18.63■□□□□ 0.57
LITAF-211ENST00000572255 ZNF528Q3MIS6 628 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 CBWD2Q8IUF1 395 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 TMEM86AQ8N2M4 240 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 OR5B17Q8NGF7 314 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 ANKRD36BP1Q96IX9 119 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 GCNAQ96QF7 691 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 TASP1Q9H6P5 420 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 MAGEF1Q9HAY2 307 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 DDX43Q9NXZ2 648 aaKnown RBP18.63■□□□□ 0.57
LITAF-211ENST00000572255 HSPBP1Q9NZL4 362 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 SNX9Q9Y5X1 595 aa18.63■□□□□ 0.57
LITAF-211ENST00000572255 DENND4CQ5VZ89 1909 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 DPYSL4O14531 572 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 CHADO15335 359 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 ACAT1P24752 427 aaKnown RBP18.62■□□□□ 0.57
LITAF-211ENST00000572255 MYL7Q01449 175 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 CSTF1Q05048 431 aaKnown RBP18.62■□□□□ 0.57
LITAF-211ENST00000572255 SURF1Q15526 300 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 OSTM1Q86WC4 334 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 ZNF507Q8TCN5 953 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 CSGALNACT1Q8TDX6 532 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 LEO1Q8WVC0 666 aaPredicted RBP18.62■□□□□ 0.57
LITAF-211ENST00000572255 FAM3CQ92520 227 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 LRRC3BQ96PB8 259 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 ACBD6Q9BR61 282 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 PI4K2AQ9BTU6 479 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 KIAA1586Q9HCI6 787 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 PCDHA7Q9UN72 937 aa18.62■□□□□ 0.57
LITAF-211ENST00000572255 R3HCC1Q9Y3T6 440 aaKnown RBP18.62■□□□□ 0.57
LITAF-211ENST00000572255 OBSL1O75147 1896 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms