RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 TUBGCP4Q9UGJ1 667 aa11.38□□□□□ -0.59
CTDNEP1-202ENST00000570380 MBD1Q9UIS9 605 aaPredicted RBP11.38□□□□□ -0.59
CTDNEP1-202ENST00000570380 HELZP42694 1942 aaKnown RBP11.38□□□□□ -0.59
CTDNEP1-202ENST00000570380 ANTXRLA6NF34 631 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 EIF4E1BA6NMX2 242 aaKnown RBP11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 WNT7AO00755 349 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 ABLIM1O14639 778 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 TNFRSF10BO14763 440 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 LARGE1O95461 756 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 ATF6P18850 670 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 CDC25CP30307 473 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 HSPA4P34932 840 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 PTGER3P43115 390 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 AARSP49588 968 aaKnown RBP eCLIP11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 ZNF423Q2M1K9 1284 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 SLC10A6Q3KNW5 377 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 SLC23A3Q6PIS1 610 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 TMEM150AQ86TG1 271 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 SYT12Q8IV01 421 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 FRMD1Q8N878 549 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 MAB21L3Q8N8X9 362 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 GLIS3Q8NEA6 775 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 MDGA1Q8NFP4 955 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 CD101Q93033 1021 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 LRIG1Q96JA1 1093 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 IFT74Q96LB3 600 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 CNOT6LQ96LI5 555 aaKnown RBP11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 MTMR9Q96QG7 549 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 CCDC86Q9H6F5 360 aaKnown RBP11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 TUFT1Q9NNX1 390 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 FSCN3Q9NQT6 498 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 CACNA2D2Q9NY47 1150 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 MYOFQ9NZM1 2061 aa11.37□□□□□ -0.59
CTDNEP1-202ENST00000570380 SCN1AP35498 2009 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 ARHGEF35A5YM69 484 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 CYSRT1A8MQ03 144 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 DTNBO60941 627 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 MCF2P10911 925 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 PROZP22891 400 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 CDR1P51861 262 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 BFSP1Q12934 665 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 STK3Q13188 491 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 NR5A1Q13285 461 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 MYBPC2Q14324 1141 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 OVOS1Q6IE37 1185 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 CC2D1AQ6P1N0 951 aaPredicted RBP11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 ARMCX6Q7L4S7 300 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 TAS1R3Q7RTX0 852 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 USP37Q86T82 979 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 TMEFF1Q8IYR6 380 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 HDDC3Q8N4P3 179 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 OLIG1Q8TAK6 271 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 MDM1Q8TC05 714 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 USP33Q8TEY7 942 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 RLN3Q8WXF3 142 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 TNFRSF25Q93038 417 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 ZNF274Q96GC6 653 aaPredicted RBP11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 GCNAQ96QF7 691 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 FNBP1Q96RU3 617 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 TARS2Q9BW92 718 aaKnown RBP11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 ECT2Q9H8V3 914 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 TDP1Q9NUW8 608 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 HSFX1Q9UBD0 423 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 RAXQ9Y2V3 346 aa11.36□□□□□ -0.59
CTDNEP1-202ENST00000570380 ATXN2Q99700 1313 aaKnown RBP11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 NAV2Q8IVL1 2488 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 CD59P13987 128 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 HNRNPLP14866 589 aaKnown RBP eCLIP11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 NMT1P30419 496 aaKnown RBP11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 AVPR1AP37288 418 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 SPAG1Q07617 926 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 PDGFRLQ15198 375 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 SEZ6Q53EL9 994 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 C2orf27AQ580R0 203 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 BMP2KLQ5H9B9 411 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 CPLX2Q6PUV4 134 aaKnown RBP11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 CCNI2Q6ZMN8 369 aaPredicted RBP11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 LPCAT2Q7L5N7 544 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 CPA6Q8N4T0 437 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 GIPC2Q8TF65 315 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 ADAMTS14Q8WXS8 1223 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 EXOC4Q96A65 974 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 ZBTB45Q96K62 511 aaPredicted RBP11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 SEPT5Q99719 369 aaPredicted RBP11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 TCHPQ9BT92 498 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 MRPL4Q9BYD3 311 aaKnown RBP11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 KIF9Q9HAQ2 790 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 SCUBE2Q9NQ36 999 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 ZMYM5Q9UJ78 669 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 PILRBQ9UKJ0 227 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 PHLPP2Q6ZVD8 1323 aa11.35□□□□□ -0.59
CTDNEP1-202ENST00000570380 CCDC169A6NNP5 214 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 K7EQS6 105 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 NEMFO60524 1076 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 F11P03951 625 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 PRB1P04280 392 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 CFIP05156 583 aa11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 HARSP12081 509 aaKnown RBP11.34□□□□□ -0.59
CTDNEP1-202ENST00000570380 XBP1P17861 261 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms