RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 NME7Q9Y5B8 376 aa23.92■■□□□ 1.42
VCPKMT-205ENST00000569518 RAB27AP51159 221 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 PDCL2Q8N4E4 241 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 KRT35Q92764 455 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 WNT8AQ9H1J5 351 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 PARVAQ9NVD7 372 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 BRCA2P51587 3418 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 KPNA7A9QM74 516 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 PGRMC1O00264 195 aaKnown RBP23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 MICAL2O94851 1124 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 CKBP12277 381 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 CTNNA2P26232 953 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 CTNNA1P35221 906 aaKnown RBP23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 MLH1P40692 756 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 MARCKSL1P49006 195 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 PEX5P50542 639 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 SGO2Q562F6 1265 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 AGMOQ6ZNB7 445 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 LPPQ93052 612 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 HEXIM2Q96MH2 286 aaKnown RBP23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 GIT1Q9Y2X7 761 aa23.91■■□□□ 1.42
VCPKMT-205ENST00000569518 TAF6P49848 677 aa23.9■■□□□ 1.42
VCPKMT-205ENST00000569518 PTPN20Q4JDL3 420 aa23.9■■□□□ 1.42
VCPKMT-205ENST00000569518 UNC93AQ86WB7 457 aa23.9■■□□□ 1.42
VCPKMT-205ENST00000569518 ERICH1Q86X53 443 aa23.9■■□□□ 1.42
VCPKMT-205ENST00000569518 KBTBD7Q8WVZ9 684 aa23.9■■□□□ 1.42
VCPKMT-205ENST00000569518 GAD1Q99259 594 aa23.9■■□□□ 1.42
VCPKMT-205ENST00000569518 UNC93B1Q9H1C4 597 aa23.9■■□□□ 1.42
VCPKMT-205ENST00000569518 SLC38A7Q9NVC3 462 aa23.9■■□□□ 1.42
VCPKMT-205ENST00000569518 A0A0U1RQF3 1178 aa23.89■■□□□ 1.42
VCPKMT-205ENST00000569518 TARSL2A2RTX5 802 aaKnown RBP23.89■■□□□ 1.42
VCPKMT-205ENST00000569518 ARL5CA6NH57 179 aa23.89■■□□□ 1.42
VCPKMT-205ENST00000569518 ARVCFO00192 962 aa23.89■■□□□ 1.42
VCPKMT-205ENST00000569518 CLCN6P51797 869 aa23.89■■□□□ 1.42
VCPKMT-205ENST00000569518 AFF1P51825 1210 aaKnown RBP23.89■■□□□ 1.42
VCPKMT-205ENST00000569518 SV2CQ496J9 727 aa23.89■■□□□ 1.42
VCPKMT-205ENST00000569518 LCLAT1Q6UWP7 414 aa23.89■■□□□ 1.42
VCPKMT-205ENST00000569518 UBL4BQ8N7F7 174 aa23.89■■□□□ 1.42
VCPKMT-205ENST00000569518 KBTBD13C9JR72 458 aa23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 MYO1FO00160 1098 aa23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 SPOPO43791 374 aa23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 LILRA4P59901 499 aa23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 RNASE9P60153 205 aaKnown RBP23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 MBTPS1Q14703 1052 aa23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 PPP1R15BQ5SWA1 713 aa23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 PAK6Q9NQU5 681 aaPredicted RBP23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 RNF216Q9NWF9 866 aaPredicted RBP23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 PCDHA3Q9Y5H8 950 aa23.89■■□□□ 1.41
VCPKMT-205ENST00000569518 CCDC66A2RUB6 948 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 PROSCO94903 275 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 SLC1A1P43005 524 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 GPD2P43304 727 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 GSCP56915 257 aaPredicted RBP23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 C3orf20Q8ND61 904 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 FEZF2Q8TBJ5 459 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 RNPC3Q96LT9 517 aaKnown RBP23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 ADAM2Q99965 735 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 ARGLU1Q9NWB6 273 aaPredicted RBP23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 MIOSQ9NXC5 875 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 STRIP2Q9ULQ0 834 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 PTPN22Q9Y2R2 807 aa23.88■■□□□ 1.41
VCPKMT-205ENST00000569518 TMEM191CA6NGB0 347 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 M0QYV0 167 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 TUBBP07437 444 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 STILQ15468 1287 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 WDR93Q6P2C0 686 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 CPXM1Q96SM3 734 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 L1RE1Q9UN81 338 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 DNM1LO00429 736 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 GJB6O95452 261 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 THP07101 528 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 FGFR1P11362 822 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 CDK7P50613 346 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 CYP4A22Q5TCH4 519 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 DNAJC24Q6P3W2 148 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 ACOT1Q86TX2 421 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 C12orf29Q8N999 325 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 SEZ6LQ9BYH1 1024 aa23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 TSPYL2Q9H2G4 693 aaPredicted RBP23.87■■□□□ 1.41
VCPKMT-205ENST00000569518 CEP350Q5VT06 3117 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 CCDC151A5D8V7 595 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 MAN1A1P33908 653 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 RPL7AP62424 266 aaKnown RBP23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 VSNL1P62760 191 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 PDCLQ13371 301 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 BRD3Q15059 726 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 TOP6BLQ8N6T0 577 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 OR6B3Q8NGW1 331 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 LRRC1Q9BTT6 524 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 TJP2Q9UDY2 1190 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 TSPAN16Q9UKR8 245 aa23.86■■□□□ 1.41
VCPKMT-205ENST00000569518 PFKMP08237 780 aa23.85■■□□□ 1.41
VCPKMT-205ENST00000569518 GABRB2P47870 512 aa23.85■■□□□ 1.41
VCPKMT-205ENST00000569518 SCNN1GP51170 649 aa23.85■■□□□ 1.41
VCPKMT-205ENST00000569518 TAP1Q03518 808 aa23.85■■□□□ 1.41
VCPKMT-205ENST00000569518 ZNF211Q13398 564 aaPredicted RBP23.85■■□□□ 1.41
VCPKMT-205ENST00000569518 PKDCCQ504Y2 493 aa23.85■■□□□ 1.41
VCPKMT-205ENST00000569518 ZNF598Q86UK7 904 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms