RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 MAF1Q9H063 256 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 RRN3Q9NYV6 651 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 FAM30AQ9NZY2 134 aa6.84□□□□□ -1.31
UBR1-208ENST00000569066 AGR2O95994 175 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 MC2RQ01718 297 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 RALBP1Q15311 655 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 FAM160B1Q5W0V3 765 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 RAP1GAP2Q684P5 730 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 FUKQ8N0W3 1084 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 AOPEPQ8N6M6 819 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 OR1N1Q8NGS0 311 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 EIF2AK1Q9BQI3 630 aaKnown RBP6.83□□□□□ -1.32
UBR1-208ENST00000569066 MAGEB5Q9BZ81 275 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 ETAA1Q9NY74 926 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 IPO5O00410 1097 aaKnown RBP6.83□□□□□ -1.32
UBR1-208ENST00000569066 POLRMTO00411 1230 aaKnown RBP6.83□□□□□ -1.32
UBR1-208ENST00000569066 ASNA1O43681 348 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 CKBP12277 381 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 BTF3P20290 206 aaKnown RBP6.83□□□□□ -1.32
UBR1-208ENST00000569066 TCTN3Q6NUS6 607 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.83□□□□□ -1.32
UBR1-208ENST00000569066 LGI4Q8N135 537 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 TMEM120AQ9BXJ8 343 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 HSFX1Q9UBD0 423 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 HESX1Q9UBX0 185 aa6.83□□□□□ -1.32
UBR1-208ENST00000569066 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 GOLGA6L3A6NEY3 463 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 hCG_1984214I3L0E3 225 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 ZNF185O15231 689 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 MAPK9P45984 424 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 LILRA4P59901 499 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 METRNLQ641Q3 311 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 SPTY2D1Q68D10 685 aaPredicted RBP6.82□□□□□ -1.32
UBR1-208ENST00000569066 CASS4Q9NQ75 786 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 RGL1Q9NZL6 768 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 LZTS1Q9Y250 596 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 MRPS17Q9Y2R5 130 aaKnown RBP6.82□□□□□ -1.32
UBR1-208ENST00000569066 RNF114Q9Y508 228 aa6.82□□□□□ -1.32
UBR1-208ENST00000569066 AREL1O15033 823 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 FOXS1O43638 330 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 ANXA1P04083 346 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 ACVR2AP27037 513 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 SERPINF1P36955 418 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 PTDSS1P48651 473 aaKnown RBP6.81□□□□□ -1.32
UBR1-208ENST00000569066 POU5F1BQ06416 359 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 TAPT1Q6NXT6 567 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 LVRNQ6Q4G3 990 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 PSD4Q8NDX1 1056 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 MDGA1Q8NFP4 955 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 CYP2W1Q8TAV3 490 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 FEZF2Q8TBJ5 459 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 ZNF483Q8TF39 744 aaPredicted RBP6.81□□□□□ -1.32
UBR1-208ENST00000569066 RILPL2Q969X0 211 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 TRIB1Q96RU8 372 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 MESP1Q9BRJ9 268 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 ISCA1Q9BUE6 129 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 CNPPD1Q9BV87 410 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 TEX101Q9BY14 249 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 HEYLQ9NQ87 328 aaPredicted RBP6.81□□□□□ -1.32
UBR1-208ENST00000569066 PPP4R1LQ9P1A2 415 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 LAMTOR5O43504 91 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 SRGNP10124 158 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 GYS1P13807 737 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 CNR2P34972 360 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 EPHB4P54760 987 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 TAF2Q6P1X5 1199 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 SEC61A2Q9H9S3 476 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 VPS45Q9NRW7 570 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 GTF2A1LQ9UNN4 478 aa6.81□□□□□ -1.32
UBR1-208ENST00000569066 SYT5O00445 386 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 PECAM1P16284 738 aaPredicted RBP6.8□□□□□ -1.32
UBR1-208ENST00000569066 APOBEC3AP31941 199 aaPredicted RBP6.8□□□□□ -1.32
UBR1-208ENST00000569066 TCF15Q12870 199 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 SLC29A2Q14542 456 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 NPY5RQ15761 445 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 TMTC4Q5T4D3 741 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 FAM102AQ5T9C2 384 aaPredicted RBP6.8□□□□□ -1.32
UBR1-208ENST00000569066 TSHZ3Q63HK5 1081 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 SULT6B1Q6IMI4 303 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 MFSD5Q6N075 450 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 KIAA0408Q6ZU52 694 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 TMEM151BQ8IW70 566 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 YAF2Q8IY57 180 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 PAF1Q8N7H5 531 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 PCDHAC1Q9H158 963 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 USP40Q9NVE5 1235 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 LOC102723971A0A1B0GUV8 181 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 RRP9O43818 475 aaKnown RBP6.8□□□□□ -1.32
UBR1-208ENST00000569066 INHBBP09529 407 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 CPT1AP50416 773 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 HSD11B2P80365 405 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 NHLH2Q02577 135 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 PRKG1Q13976 671 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 DRICH1Q6PGQ1 229 aaPredicted RBP6.8□□□□□ -1.32
UBR1-208ENST00000569066 D2HGDHQ8N465 521 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 DDX17Q92841 729 aaKnown RBP6.8□□□□□ -1.32
UBR1-208ENST00000569066 PPP1R9BQ96SB3 815 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 NELFAQ9H3P2 528 aa6.8□□□□□ -1.32
UBR1-208ENST00000569066 USP15Q9Y4E8 981 aaPredicted RBP6.8□□□□□ -1.32
UBR1-208ENST00000569066 USP1O94782 785 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms