RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ATF6P18850 670 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 DDX6P26196 483 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNX29-207ENST00000568949 LILRA4P59901 499 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 ANAPC15P60006 121 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 SPAG1Q07617 926 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 TAF12Q16514 161 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 KYAT1Q16773 422 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 TTC38Q5R3I4 469 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 SH3PXD2AQ5TCZ1 1133 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 TMEM130Q8N3G9 435 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 C4orf32Q8N8J7 132 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 TMEM161BQ8NDZ6 487 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 SNX29Q8TEQ0 813 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 SENP8Q96LD8 212 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 RAB34Q9BZG1 259 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 FOXP1Q9H334 677 aaPredicted RBP13.53□□□□□ -0.24
SNX29-207ENST00000568949 EBF3Q9H4W6 596 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 PCNX2A6NKB5 2137 aa13.52□□□□□ -0.24
SNX29-207ENST00000568949 ASCC3Q8N3C0 2202 aaKnown RBP13.52□□□□□ -0.24
SNX29-207ENST00000568949 SFI1A8K8P3 1242 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 E9PMD0 336 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 KHNYNO15037 678 aaKnown RBP13.52□□□□□ -0.25
SNX29-207ENST00000568949 CYP11A1P05108 521 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 PLS3P13797 630 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 GUCY2CP25092 1073 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 AVPR1AP37288 418 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 TRAPPC10P48553 1259 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 GALK1P51570 392 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 SMTNP53814 917 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 PPP2R3AQ06190 1150 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 SMARCB1Q12824 385 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 BFSP1Q12934 665 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 PDGFRLQ15198 375 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 MGAT5BQ3V5L5 792 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 TRIM68Q6AZZ1 485 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 IGSF22Q8N9C0 903 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 OR10T2Q8NGX3 314 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 C2orf15Q8WU43 125 aaKnown RBP13.52□□□□□ -0.25
SNX29-207ENST00000568949 GATA6Q92908 595 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 USP13Q92995 863 aaPredicted RBP13.52□□□□□ -0.25
SNX29-207ENST00000568949 ACDQ96AP0 544 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 SEPT5Q99719 369 aaPredicted RBP13.52□□□□□ -0.25
SNX29-207ENST00000568949 P2RY13Q9BPV8 354 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 ZCWPW1Q9H0M4 648 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 FBRSL1Q9HCM7 1045 aaKnown RBP13.52□□□□□ -0.25
SNX29-207ENST00000568949 TMEM9BQ9NQ34 198 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 TDP1Q9NUW8 608 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 POLR3BQ9NW08 1133 aaPredicted RBP13.52□□□□□ -0.25
SNX29-207ENST00000568949 TBX20Q9UMR3 447 aa13.52□□□□□ -0.25
SNX29-207ENST00000568949 THADAQ6YHU6 1953 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 ANK1P16157 1881 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 SRRM3A6NNA2 597 aaPredicted RBP13.51□□□□□ -0.25
SNX29-207ENST00000568949 LACTBL1A8MY62 500 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 DCLK1O15075 740 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 ADRB2P07550 413 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 SPINK2P20155 84 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
SNX29-207ENST00000568949 GUCY2FP51841 1108 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 DMC1Q14565 340 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 ZNF268Q14587 947 aaPredicted RBP13.51□□□□□ -0.25
SNX29-207ENST00000568949 SPATA1Q5VX52 437 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 KRT79Q5XKE5 535 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 CC2D1AQ6P1N0 951 aaPredicted RBP13.51□□□□□ -0.25
SNX29-207ENST00000568949 TMEM150AQ86TG1 271 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 CD302Q8IX05 232 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 RPLP0P6Q8NHW5 317 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 SPPL2BQ8TCT7 592 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 KCNN1Q92952 543 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 SCNM1Q9BWG6 230 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 HAPLN2Q9GZV7 340 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 DSEQ9UL01 958 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 CCL26Q9Y258 94 aa13.51□□□□□ -0.25
SNX29-207ENST00000568949 TSC2P49815 1807 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 H0YCG3 227 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 CDX4O14627 284 aaPredicted RBP13.5□□□□□ -0.25
SNX29-207ENST00000568949 PPEF2O14830 753 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 F11P03951 625 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 HAPLN1P10915 354 aaPredicted RBP13.5□□□□□ -0.25
SNX29-207ENST00000568949 ARSAP15289 507 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 GBP1P32455 592 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 GJA4P35212 333 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 TNFSF9P41273 254 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 NLRP12P59046 1061 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 GUCY1B3Q02153 619 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 ENOX2Q16206 610 aaKnown RBP13.5□□□□□ -0.25
SNX29-207ENST00000568949 SLC39A12Q504Y0 691 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 USP39Q53GS9 565 aaKnown RBP13.5□□□□□ -0.25
SNX29-207ENST00000568949 PMS2CLQ68D20 193 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 MON1AQ86VX9 555 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 CPA6Q8N4T0 437 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 MAB21L3Q8N8X9 362 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 CCDC26Q8TAB7 109 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 GIPC2Q8TF65 315 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 C8orf76Q96K31 380 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 RPF1Q9H9Y2 349 aaKnown RBP13.5□□□□□ -0.25
SNX29-207ENST00000568949 ANKRD11Q6UB99 2663 aaPredicted RBP13.5□□□□□ -0.25
SNX29-207ENST00000568949 KIAA1549LQ6ZVL6 1849 aa13.5□□□□□ -0.25
SNX29-207ENST00000568949 SCN1AP35498 2009 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 MYO16Q9Y6X6 1858 aa13.49□□□□□ -0.25
SNX29-207ENST00000568949 PIRO00625 290 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms