RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 FEZF2Q8TBJ5 459 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 GPR152Q8TDT2 470 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 PAGE5Q96GU1 130 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 FAXDC2Q96IV6 333 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 DMAC2Q9NW81 257 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 HCFC1R1Q9NWW0 138 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 SIT1Q9Y3P8 196 aa12.03□□□□□ -0.48
CDH3-206ENST00000567674 TIMM13Q9Y5L4 95 aaPredicted RBP12.03□□□□□ -0.48
CDH3-206ENST00000567674 KANSL1LA0AUZ9 987 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 KRBA1A5PL33 1030 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 PPEF2O14830 753 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 RHOBTB3O94955 611 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 CSH1P0DML2 217 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 CSH2P0DML3 217 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 HAPLN1P10915 354 aaPredicted RBP12.02□□□□□ -0.49
CDH3-206ENST00000567674 PFKFB1P16118 471 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 POLR2BP30876 1174 aaKnown RBP12.02□□□□□ -0.49
CDH3-206ENST00000567674 HOXD13P35453 343 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 MAGEA11P43364 429 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 SYKP43405 635 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 RPS9P46781 194 aaKnown RBP12.02□□□□□ -0.49
CDH3-206ENST00000567674 PPP3CCP48454 512 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 GPC5P78333 572 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 PKP1Q13835 747 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 SLC5A9Q2M3M2 681 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 SLC39A12Q504Y0 691 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 WSCD1Q658N2 575 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 CWF19L1Q69YN2 538 aaKnown RBP12.02□□□□□ -0.49
CDH3-206ENST00000567674 FAM171BQ6P995 826 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 VSTM1Q6UX27 236 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 C4orf50Q6ZRC1 276 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 TMC8Q8IU68 726 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 ELOA2Q8IYF1 753 aaPredicted RBP12.02□□□□□ -0.49
CDH3-206ENST00000567674 PDCL2Q8N4E4 241 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 TMEM105Q8N8V8 129 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 RSAD2Q8WXG1 361 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 SYAP1Q96A49 352 aaPredicted RBP12.02□□□□□ -0.49
CDH3-206ENST00000567674 RMDN1Q96DB5 314 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 SAAL1Q96ER3 474 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 TRMT2BQ96GJ1 504 aaKnown RBP12.02□□□□□ -0.49
CDH3-206ENST00000567674 MYRFLQ96LU7 910 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 GCNAQ96QF7 691 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 TRMT61BQ9BVS5 477 aaKnown RBP12.02□□□□□ -0.49
CDH3-206ENST00000567674 DNAJC25Q9H1X3 360 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 PCIF1Q9H4Z3 704 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 FAM124BQ9H5Z6 455 aaPredicted RBP12.02□□□□□ -0.49
CDH3-206ENST00000567674 PDE11AQ9HCR9 933 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 EXOC1Q9NV70 894 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 SIX4Q9UIU6 781 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 CDH9Q9ULB4 789 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 TRAF3IP3Q9Y228 551 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 ZDHHC9Q9Y397 364 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 ANK1P16157 1881 aa12.02□□□□□ -0.49
CDH3-206ENST00000567674 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 NOTCH4Q99466 2003 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 DNAH14Q0VDD8 3507 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 CHADO15335 359 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 NARSO43776 548 aaKnown RBP12.01□□□□□ -0.49
CDH3-206ENST00000567674 KLRC4O43908 158 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 MOSPD3O75425 235 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 VNN2O95498 520 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 RPN1P04843 607 aaKnown RBP12.01□□□□□ -0.49
CDH3-206ENST00000567674 CFHP08603 1231 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 RFX1P22670 979 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 WARSP23381 471 aaKnown RBP12.01□□□□□ -0.49
CDH3-206ENST00000567674 PDE6CP51160 858 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 GUCY2FP51841 1108 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 CYP24A1Q07973 514 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 FCHO2Q0JRZ9 810 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 CUL4BQ13620 913 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 PUM1Q14671 1186 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDH3-206ENST00000567674 MLF2Q15773 248 aaPredicted RBP12.01□□□□□ -0.49
CDH3-206ENST00000567674 ZNF528Q3MIS6 628 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 INTS6LQ5JSJ4 861 aaKnown RBP12.01□□□□□ -0.49
CDH3-206ENST00000567674 ZNF852Q6ZMS4 543 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 TRAPPC11Q7Z392 1133 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 DTWD2Q8NBA8 298 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 ATAD1Q8NBU5 361 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 FLCNQ8NFG4 579 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 PJA1Q8NG27 643 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 OR10T2Q8NGX3 314 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 TAF4BQ92750 862 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 CLDN23Q96B33 292 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 MCRS1Q96EZ8 462 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 HPDLQ96IR7 371 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 SPATA17Q96L03 361 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 CNTNAP3BQ96NU0 1288 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 CGRRF1Q99675 332 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 FGFBP2Q9BYJ0 223 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 CNTNAP3Q9BZ76 1288 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 TASP1Q9H6P5 420 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 C8orf33Q9H7E9 229 aaPredicted RBP12.01□□□□□ -0.49
CDH3-206ENST00000567674 DDX43Q9NXZ2 648 aaKnown RBP12.01□□□□□ -0.49
CDH3-206ENST00000567674 SERTAD1Q9UHV2 236 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 VPS13AQ96RL7 3174 aa12.01□□□□□ -0.49
CDH3-206ENST00000567674 KMT2BQ9UMN6 2715 aaPredicted RBP12.01□□□□□ -0.49
CDH3-206ENST00000567674 PTPRZ1P23471 2315 aaPredicted RBP12□□□□□ -0.49
CDH3-206ENST00000567674 CALUO43852 315 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms