RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 VCPP55072 806 aaKnown RBP13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 CLDN10P78369 228 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 TSPY1Q01534 308 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 BFSP1Q12934 665 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 KCNB1Q14721 858 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 NFE2Q16621 373 aaPredicted RBP13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 SOWAHAQ2M3V2 549 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 IER5LQ5T953 404 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 LMBRD2Q68DH5 695 aaPredicted RBP13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 POTEHQ6S545 545 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 ITIH5Q86UX2 942 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 HS6ST3Q8IZP7 471 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 TTC9BQ8N6N2 239 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 FAM122AQ96E09 287 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 MCRS1Q96EZ8 462 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 FAM84AQ96KN4 292 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 CGRRF1Q99675 332 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 GZF1Q9H116 711 aaPredicted RBP13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 MFSD1Q9H3U5 465 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 SNX9Q9Y5X1 595 aa13.58□□□□□ -0.24
LPCAT4-206ENST00000566581 PTPRZ1P23471 2315 aaPredicted RBP13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 KRBA1A5PL33 1030 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 FGF19O95750 216 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 STAU1O95793 577 aaKnown RBP13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 CST3P01034 146 aaPredicted RBP13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 CFHP08603 1231 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 DLATP10515 647 aaKnown RBP13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 HAPLN1P10915 354 aaPredicted RBP13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 MYL4P12829 197 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 NPR3P17342 541 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 PCSK1P29120 753 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 AP3M2P53677 418 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 GPC5P78333 572 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 MYL7Q01449 175 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 DNAJB7Q7Z6W7 309 aaPredicted RBP13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 TMC8Q8IU68 726 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 FMR1NBQ8N0W7 255 aaPredicted RBP13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 SIX5Q8N196 739 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 GPR152Q8TDT2 470 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 PARD3BQ8TEW8 1205 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 ZNF516Q92618 1163 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 ELSPBP1Q96BH3 223 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 CCDC127Q96BQ5 260 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 ASB16Q96NS5 453 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 TRPV4Q9HBA0 871 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 ABCB6Q9NP58 842 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 DDX43Q9NXZ2 648 aaKnown RBP13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 TRAF3IP3Q9Y228 551 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 PCDHB5Q9Y5E4 795 aa13.57□□□□□ -0.24
LPCAT4-206ENST00000566581 FAM186AA6NE01 2351 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 GOLGA6L4A6NEF3 574 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 NRG2O14511 850 aaPredicted RBP13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 AOC1P19801 751 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 PFKPQ01813 784 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 VEPH1Q14D04 833 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 NFIL3Q16649 462 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 MGAT5BQ3V5L5 792 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 INTS6LQ5JSJ4 861 aaKnown RBP13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 FAM78AQ5JUQ0 283 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 GAREM2Q75VX8 874 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 ADGRF2Q8IZF7 708 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 GUF1Q8N442 669 aaKnown RBP13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 SHKBP1Q8TBC3 707 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 SMARCD2Q92925 531 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 PKMYT1Q99640 499 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 KXD1Q9BQD3 176 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 ZFP14Q9HCL3 533 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 TMLHEQ9NVH6 421 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 TICRRQ7Z2Z1 1910 aa13.56□□□□□ -0.24
LPCAT4-206ENST00000566581 IKBKBO14920 756 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 MAPK13O15264 365 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 CALUO43852 315 aaPredicted RBP13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 TACC1O75410 805 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 SOAT2O75908 522 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 NR3C1P04150 777 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 ATF6P18850 670 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 FCARP24071 287 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 ATICP31939 592 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 PTPN5P54829 565 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 SNW1Q13573 536 aaKnown RBP13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 CWF19L1Q69YN2 538 aaKnown RBP13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 FAM171BQ6P995 826 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 OSTM1Q86WC4 334 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 TMEM105Q8N8V8 129 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 ENGASEQ8NFI3 743 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 ST13P5Q8NFI4 369 aaPredicted RBP13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 TMC2Q8TDI7 906 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 KBTBD7Q8WVZ9 684 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 E2F7Q96AV8 911 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 SHDQ96IW2 340 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 ZSWIM3Q96MP5 696 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 SEPT5Q99719 369 aaPredicted RBP13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 IRF2BPLQ9H1B7 796 aa13.55□□□□□ -0.24
LPCAT4-206ENST00000566581 VRTNQ9H8Y1 702 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms