RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TRAPPC3O43617 180 aa19.78■□□□□ 0.76
MSLN-207ENST00000566549 ITGBL1O95965 494 aaPredicted RBP19.78■□□□□ 0.76
MSLN-207ENST00000566549 ZSCAN5DPP0CG00 497 aa19.78■□□□□ 0.76
MSLN-207ENST00000566549 PPP1R13LQ8WUF5 828 aa19.78■□□□□ 0.76
MSLN-207ENST00000566549 TRAIPQ9BWF2 469 aa19.78■□□□□ 0.76
MSLN-207ENST00000566549 ZWILCHQ9H900 591 aa19.78■□□□□ 0.76
MSLN-207ENST00000566549 CHN1P15882 459 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 EIF4BP23588 611 aaKnown RBP19.77■□□□□ 0.76
MSLN-207ENST00000566549 RFC1P35251 1148 aaPredicted RBP19.77■□□□□ 0.76
MSLN-207ENST00000566549 CETN2P41208 172 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 KCNT1Q5JUK3 1230 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 C6orf118Q5T5N4 469 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 IZUMO3Q5VZ72 239 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 SYDE1Q6ZW31 735 aaPredicted RBP19.77■□□□□ 0.76
MSLN-207ENST00000566549 EMC1Q8N766 993 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 JOSD2Q8TAC2 188 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 NLRP7Q8WX94 980 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 RBM41Q96IZ5 413 aaKnown RBP19.77■□□□□ 0.76
MSLN-207ENST00000566549 PDZD7Q9H5P4 517 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 SYNCQ9H7C4 482 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 PCDHGC3Q9UN70 934 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 NEU2Q9Y3R4 380 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 FOXO6A8MYZ6 492 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 ASAP2O43150 1006 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 ETS1P14921 441 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 PSMA2P25787 234 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 RAD23BP54727 409 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 LAMC2Q13753 1193 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 AUHQ13825 339 aaKnown RBP19.77■□□□□ 0.76
MSLN-207ENST00000566549 AMHR2Q16671 573 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 QPCTQ16769 361 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 PPP1R15BQ5SWA1 713 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 TRMT10CQ7L0Y3 403 aaKnown RBP19.77■□□□□ 0.76
MSLN-207ENST00000566549 RCOR2Q8IZ40 523 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 C3orf20Q8ND61 904 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 ZNF518BQ9C0D4 1074 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 HOMER3Q9NSC5 361 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 ZNF148Q9UQR1 794 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 GINS2Q9Y248 185 aa19.77■□□□□ 0.76
MSLN-207ENST00000566549 PDHXO00330 501 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 IL18RAPO95256 599 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 ARF4P18085 180 aaPredicted RBP19.76■□□□□ 0.75
MSLN-207ENST00000566549 PSMC1P62191 440 aaKnown RBP19.76■□□□□ 0.75
MSLN-207ENST00000566549 DYNLT1P63172 113 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 SF3A3Q12874 501 aaKnown RBP eCLIP19.76■□□□□ 0.75
MSLN-207ENST00000566549 P3H1Q32P28 736 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 ZNF484Q5JVG2 852 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 SPOCD1Q6ZMY3 1216 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 CPXM1Q96SM3 734 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 SYT17Q9BSW7 474 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 CTNNAL1Q9UBT7 734 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 LIASO43766 372 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 GH1P01241 217 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 POLR2BP30876 1174 aaKnown RBP19.76■□□□□ 0.75
MSLN-207ENST00000566549 MAMDC4Q6UXC1 1216 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 B4GALNT4Q76KP1 1039 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 CCDC89Q8N998 374 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 RASSF4Q9H2L5 321 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 ADAM7Q9H2U9 754 aa19.76■□□□□ 0.75
MSLN-207ENST00000566549 CNOT10Q9H9A5 744 aaKnown RBP19.76■□□□□ 0.75
MSLN-207ENST00000566549 PIK3R2O00459 728 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 KRT3P12035 628 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 YWHAEP62258 255 aaKnown RBP19.75■□□□□ 0.75
MSLN-207ENST00000566549 ZNF792Q3KQV3 632 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 C9orf72Q96LT7 481 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 FAM129AQ9BZQ8 928 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 ELOVL4Q9GZR5 314 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 SAE1Q9UBE0 346 aaPredicted RBP19.75■□□□□ 0.75
MSLN-207ENST00000566549 PNMA3Q9UL41 463 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 TJP3O95049 919 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 AGTP01019 485 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 CDH5P33151 784 aaPredicted RBP19.75■□□□□ 0.75
MSLN-207ENST00000566549 MMP13P45452 471 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 LIG3P49916 1009 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 SLC4A11Q8NBS3 891 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 SHCBP1Q8NEM2 672 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 ZC3H15Q8WU90 426 aaKnown RBP19.75■□□□□ 0.75
MSLN-207ENST00000566549 BCO2Q9BYV7 579 aa19.75■□□□□ 0.75
MSLN-207ENST00000566549 METTL5Q9NRN9 209 aaKnown RBP19.75■□□□□ 0.75
MSLN-207ENST00000566549 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.75■□□□□ 0.75
MSLN-207ENST00000566549 ERBB2P04626 1255 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 CDR1P51861 262 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 PLCB3Q01970 1234 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 TMEM62Q0P6H9 643 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 PIGHQ14442 188 aaPredicted RBP19.74■□□□□ 0.75
MSLN-207ENST00000566549 SLC10A6Q3KNW5 377 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 PPTC7Q8NI37 304 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 IPO4Q8TEX9 1081 aaKnown RBP19.74■□□□□ 0.75
MSLN-207ENST00000566549 UPF1Q92900 1129 aaKnown RBP eCLIP19.74■□□□□ 0.75
MSLN-207ENST00000566549 XPO6Q96QU8 1125 aaKnown RBP19.74■□□□□ 0.75
MSLN-207ENST00000566549 C10orf88Q9H8K7 445 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 NINJ2Q9NZG7 142 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 AGAP1Q9UPQ3 857 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 EVPLQ92817 2033 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 MED7O43513 233 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 TTC4O95801 387 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 MCF2P10911 925 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 KLRC2P26717 231 aa19.74■□□□□ 0.75
MSLN-207ENST00000566549 PTPN11Q06124 597 aaPredicted RBP19.74■□□□□ 0.75
MSLN-207ENST00000566549 HP1BP3Q5SSJ5 553 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms