RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 ADAM22Q9P0K1 906 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 POLIQ9UNA4 740 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 GIT1Q9Y2X7 761 aa9.42□□□□□ -0.9
LSM3P5-201ENST00000566307 PGRMC1O00264 195 aaKnown RBP9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 KCNK3O14649 394 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF185O15231 689 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 PROSCO94903 275 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 WEE2P0C1S8 567 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 CD58P19256 250 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 TNFRSF8P28908 595 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 PEX5P50542 639 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 SV2CQ496J9 727 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 FAM47CQ5HY64 1035 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 ARHGAP17Q68EM7 881 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 TWF2Q6IBS0 349 aaKnown RBP9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 FBXO38Q6PIJ6 1188 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 LCLAT1Q6UWP7 414 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 DNAAF5Q86Y56 855 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 CRYBG2Q8N1P7 616 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 TOP6BLQ8N6T0 577 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 EIF1ADQ8N9N8 165 aaKnown RBP9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 NOA1Q8NC60 698 aaKnown RBP9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 C3orf20Q8ND61 904 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 FNIP1Q8TF40 1166 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 STK32AQ8WU08 396 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF296Q8WUU4 475 aaPredicted RBP9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 TFAP2BQ92481 460 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 WNT8BQ93098 351 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 MARVELD3Q96A59 401 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 ELMO3Q96BJ8 720 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 PARD6BQ9BYG5 372 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 SMYD3Q9H7B4 428 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 PARVAQ9NVD7 372 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 PCDHA3Q9Y5H8 950 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 SCN1AP35498 2009 aa9.41□□□□□ -0.9
LSM3P5-201ENST00000566307 A0A0U1RQF3 1178 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 MYO1FO00160 1098 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 O00370 1275 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 PTGESO14684 152 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 ERLIN1O75477 346 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 CLSTN1O94985 981 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 TFRCP02786 760 aaKnown RBP9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 COL6A1P12109 1028 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 ITGA4P13612 1032 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 COMTP21964 271 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 WARSP23381 471 aaKnown RBP9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 RRM1P23921 792 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 BRD2P25440 801 aaKnown RBP9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 RPL9P32969 192 aaKnown RBP9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 SCNN1AP37088 669 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 TAF6P49848 677 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 MAMLD1Q13495 774 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 ZNF268Q14587 947 aaPredicted RBP9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 LPIN1Q14693 890 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 SGO2Q562F6 1265 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 LRRC38Q5VT99 294 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 SCARA5Q6ZMJ2 495 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 WDTC1Q8N5D0 677 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 NIPA2Q8N8Q9 360 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 FEZF2Q8TBJ5 459 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 CPA5Q8WXQ8 436 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 PGBD4Q96DM1 585 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 CAPZA3Q96KX2 299 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 PLVAPQ9BX97 442 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 CYLDQ9NQC7 956 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 TUBGCP4Q9UGJ1 667 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 PARP2Q9UGN5 583 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 IP6K2Q9UHH9 426 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 HES2Q9Y543 173 aa9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 V9GYY5 206 aaPredicted RBP9.4□□□□□ -0.9
LSM3P5-201ENST00000566307 A0A1W2PQ45 241 aaPredicted RBP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 A0A1W2PQY0 241 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 TMEM191CA6NGB0 347 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 KPNA7A9QM74 516 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 BHMG1C9JSJ3 638 aaPredicted RBP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 ARVCFO00192 962 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 DNM1LO00429 736 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 PSTPIP1O43586 416 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 CEP104O60308 925 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 CFHP08603 1231 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 CD19P15391 556 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 AKAP5P24588 427 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 YY1P25490 414 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 THPOP40225 353 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 GPD2P43304 727 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 RPL34P49207 117 aaKnown RBP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 AARSP49588 968 aaKnown RBP eCLIP9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 CDK7P50613 346 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 GUCY2FP51841 1108 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 NDST1P52848 882 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 RWDD2BP57060 319 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 SNX16P57768 344 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 PAK2Q13177 524 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 MESDQ14696 234 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 ACAP1Q15027 740 aa9.39□□□□□ -0.91
LSM3P5-201ENST00000566307 SOWAHAQ2M3V2 549 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms