RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 ODC1P11926 461 aa32.52■■■□□ 2.8
CTCF-203ENST00000566078 ACOT1Q86TX2 421 aa32.52■■■□□ 2.8
CTCF-203ENST00000566078 HCSTQ9UBK5 93 aa32.52■■■□□ 2.8
CTCF-203ENST00000566078 PRG3Q9Y2Y8 225 aaPredicted RBP32.52■■■□□ 2.8
CTCF-203ENST00000566078 GALCP54803 685 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 SGO2Q562F6 1265 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 TMEM86AQ8N2M4 240 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 TOP1MTQ969P6 601 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 CYFIP2Q96F07 1278 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 ISCUQ9H1K1 167 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 DPEP3Q9H4B8 488 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 INTUQ9ULD6 942 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 PCDHGC3Q9UN70 934 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 STXBP5LQ9Y2K9 1186 aa32.51■■■□□ 2.8
CTCF-203ENST00000566078 TMEM189-UBE2V1I3L0A0 370 aa32.51■■■□□ 2.79
CTCF-203ENST00000566078 DGKIO75912 1065 aa32.51■■■□□ 2.79
CTCF-203ENST00000566078 CYP1A1P04798 512 aaPredicted RBP32.51■■■□□ 2.79
CTCF-203ENST00000566078 PDGFRBP09619 1106 aa32.51■■■□□ 2.79
CTCF-203ENST00000566078 FAM163BP0C2L3 166 aa32.51■■■□□ 2.79
CTCF-203ENST00000566078 OTOP2Q7RTS6 562 aa32.51■■■□□ 2.79
CTCF-203ENST00000566078 HTATIP2Q9BUP3 242 aa32.51■■■□□ 2.79
CTCF-203ENST00000566078 KIAA1257Q9ULG3 409 aa32.51■■■□□ 2.79
CTCF-203ENST00000566078 DUSP10Q9Y6W6 482 aa32.51■■■□□ 2.79
CTCF-203ENST00000566078 FTLP02792 175 aaPredicted RBP32.5■■■□□ 2.79
CTCF-203ENST00000566078 UNGP13051 313 aaPredicted RBP32.5■■■□□ 2.79
CTCF-203ENST00000566078 LMO2P25791 158 aa32.5■■■□□ 2.79
CTCF-203ENST00000566078 NAA35Q5VZE5 725 aa32.5■■■□□ 2.79
CTCF-203ENST00000566078 DNAI2Q9GZS0 605 aa32.5■■■□□ 2.79
CTCF-203ENST00000566078 TIMM13Q9Y5L4 95 aaPredicted RBP32.5■■■□□ 2.79
CTCF-203ENST00000566078 M0QZQ0 153 aa32.49■■■□□ 2.79
CTCF-203ENST00000566078 ABCB4P21439 1286 aa32.49■■■□□ 2.79
CTCF-203ENST00000566078 NOMO3P69849 1222 aa32.49■■■□□ 2.79
CTCF-203ENST00000566078 ACAD10Q6JQN1 1059 aa32.49■■■□□ 2.79
CTCF-203ENST00000566078 C16orf59Q7L2K0 433 aa32.49■■■□□ 2.79
CTCF-203ENST00000566078 TMCO2Q7Z6W1 182 aaPredicted RBP32.49■■■□□ 2.79
CTCF-203ENST00000566078 SUSD3Q96L08 255 aa32.49■■■□□ 2.79
CTCF-203ENST00000566078 MACROD2A1Z1Q3 448 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 CENPCQ03188 943 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 FAM117BQ6P1L5 589 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 C12orf29Q8N999 325 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 CPA5Q8WXQ8 436 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 IRX2Q9BZI1 471 aaPredicted RBP32.48■■■□□ 2.79
CTCF-203ENST00000566078 WDR3Q9UNX4 943 aaKnown RBP eCLIP32.48■■■□□ 2.79
CTCF-203ENST00000566078 ANKRD62A6NC57 917 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 GABRDO14764 452 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 NRP1O14786 923 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 KIF5CO60282 957 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 LSM8O95777 96 aaKnown RBP32.48■■■□□ 2.79
CTCF-203ENST00000566078 SYN1P17600 705 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 NSFP46459 744 aaKnown RBP32.48■■■□□ 2.79
CTCF-203ENST00000566078 SLC11A1P49279 550 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 CTNNBL1Q8WYA6 563 aaPredicted RBP32.48■■■□□ 2.79
CTCF-203ENST00000566078 TMEM175Q9BSA9 504 aa32.48■■■□□ 2.79
CTCF-203ENST00000566078 DDX43Q9NXZ2 648 aaKnown RBP32.48■■■□□ 2.79
CTCF-203ENST00000566078 ARHGEF37A1IGU5 675 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 ZBBXA8MT70 800 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 O00370 1275 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 TMEM253P0C7T8 217 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 LHX1P48742 406 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 DENND1BQ6P3S1 775 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 METTL23Q86XA0 190 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 SECISBP2LQ93073 1101 aaKnown RBP32.47■■■□□ 2.79
CTCF-203ENST00000566078 TNIP3Q96KP6 325 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 THAP2Q9H0W7 228 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 FAM49BQ9NUQ9 324 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 DSEQ9UL01 958 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 CEP83Q9Y592 693 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 PAXBP1Q9Y5B6 917 aa32.47■■■□□ 2.79
CTCF-203ENST00000566078 MICAL2O94851 1124 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 FGBP02675 491 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 CYP11A1P05108 521 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 TNNT1P13805 278 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 ACAT1P24752 427 aaKnown RBP32.46■■■□□ 2.79
CTCF-203ENST00000566078 CNGA2Q16280 664 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 ZNF365Q70YC5 407 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 CRYBG2Q8N1P7 616 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 C1orf131Q8NDD1 294 aaKnown RBP32.46■■■□□ 2.79
CTCF-203ENST00000566078 ABHD8Q96I13 439 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 LPIN3Q9BQK8 851 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 PCDHB8Q9UN66 801 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 FAN1Q9Y2M0 1017 aa32.46■■■□□ 2.79
CTCF-203ENST00000566078 M0QYV0 167 aa32.45■■■□□ 2.79
CTCF-203ENST00000566078 TADA2AO75478 443 aa32.45■■■□□ 2.79
CTCF-203ENST00000566078 ALDH2P05091 517 aa32.45■■■□□ 2.79
CTCF-203ENST00000566078 PSMC1P62191 440 aaKnown RBP32.45■■■□□ 2.79
CTCF-203ENST00000566078 STILQ15468 1287 aa32.45■■■□□ 2.79
CTCF-203ENST00000566078 PPP1R26Q5T8A7 1209 aaPredicted RBP32.45■■■□□ 2.79
CTCF-203ENST00000566078 TMEM35BQ8NCS4 154 aa32.45■■■□□ 2.79
CTCF-203ENST00000566078 SPATA18Q8TC71 538 aa32.45■■■□□ 2.79
CTCF-203ENST00000566078 COLEC11Q9BWP8 271 aa32.45■■■□□ 2.79
CTCF-203ENST00000566078 SALL4Q9UJQ4 1053 aa32.45■■■□□ 2.79
CTCF-203ENST00000566078 NCANO14594 1321 aa32.45■■■□□ 2.79
CTCF-203ENST00000566078 BTNL10A8MVZ5 291 aa32.44■■■□□ 2.78
CTCF-203ENST00000566078 KIF2AO00139 706 aaPredicted RBP32.44■■■□□ 2.78
CTCF-203ENST00000566078 GNG11P61952 73 aa32.44■■■□□ 2.78
CTCF-203ENST00000566078 GOLGA7BQ2TAP0 167 aa32.44■■■□□ 2.78
CTCF-203ENST00000566078 DNTTIP2Q5QJE6 756 aaKnown RBP32.44■■■□□ 2.78
CTCF-203ENST00000566078 B3GALNT2Q8NCR0 500 aa32.44■■■□□ 2.78
CTCF-203ENST00000566078 ZNF689Q96CS4 500 aaPredicted RBP32.44■■■□□ 2.78
CTCF-203ENST00000566078 MARCH5Q9NX47 278 aa32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms